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Rhox2-ps Pseudogene Detail
Summary
  • Symbol
    Rhox2-ps
  • Name
    reproductive homeobox 2, pseudogene
  • Synonyms
    Gm6310
Location &
Maps
more
  • Sequence Map
    ChrX:36864574-36865084 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646282
 pseudogene ChrX:36864465-36865084 (-)
129S1/SvImJ ENSMUSG00200022109
 pseudogene ChrX:20795809-20796319 (-)
A/J ENSMUSG00195025482
 pseudogene ChrX:23486398-23486908 (-)
AKR/J ENSMUSG00220025336
 pseudogene ChrX:20483983-20484493 (-)
BALB/cJ ENSMUSG00180012794
 pseudogene ChrX:21233085-21233595 (-)
C3H/HeJ ENSMUSG00175024850
 pseudogene ChrX:24226276-24226786 (-)
C57BL/6NJ ENSMUSG00215025941
 pseudogene ChrX:21194140-21194650 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037495
 pseudogene ChrX:31149604-31150112 (-)
CAST/EiJ ENSTCUG00005033922
 pseudogene ChrX:23350625-23351135 (-)
CBA/J ENSMUSG00210035218
 pseudogene ChrX:21540474-21540984 (-)
DBA/2J ENSMUSG00185025098
 pseudogene ChrX:32221000-32221510 (-)
FVB/NJ ENSMUSG00205008121
 pseudogene ChrX:20172652-20173162 (-)
JF1/MsJ ENSUMUG00000030507
 pseudogene ChrX:51245606-51246116 (-)
LP/J ENSMUSG00230014430
 pseudogene ChrX:38713457-38713967 (-)
NOD/ShiLtJ ENSMUSG00190022744
 pseudogene ChrX:20661455-20661965 (-)
NZO/HlLtJ ENSMUSG00225039582
 pseudogene ChrX:43919963-43920473 (-)
PWK/PhJ ENSLUMG00010038142
 pseudogene ChrX:20970144-20970654 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005040109
 pseudogene ChrX:21696147-21696657 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081195 Ensembl Gene Model | MGI Sequence Detail 511 C57BL/6J ±  kb
transcript ENSMUST00000117421 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory