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Rhox1 Gene Detail
Summary
  • Symbol
    Rhox1
  • Name
    reproductive homeobox 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3580237
    NCBI Gene: 385343
  • Member of
    Rhox cluster
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:36477457-36485911 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3580237
 protein coding gene ChrX:36477457-36485911 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035637
 protein coding gene ChrX:32165683-32177860 (-)
A/J MGP_AJ_G0035614
 protein coding gene ChrX:32238397-32247568 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0035607
 protein coding gene ChrX:31949715-31958696 (-)
C3H/HeJ MGP_C3HHeJ_G0035325
 protein coding gene ChrX:32479331-32490301 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036143
 protein coding gene ChrX:32803860-32812295 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033003
 protein coding gene ChrX:30885065-30889668 (-)
CAST/EiJ MGP_CASTEiJ_G0034615
 protein coding gene ChrX:20637739-20647440 (-)
CBA/J MGP_CBAJ_G0035294
 protein coding gene ChrX:33675171-33686185 (-)
DBA/2J MGP_DBA2J_G0035445
 protein coding gene ChrX:32046348-32054874 (-)
FVB/NJ MGP_FVBNJ_G0035392
 protein coding gene ChrX:31808819-31817072 (-)
LP/J MGP_LPJ_G0035527
 protein coding gene ChrX:32565606-32574113 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035436
 protein coding gene ChrX:34107421-34123484 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036150
 protein coding gene ChrX:32136204-32145822 (-)
PWK/PhJ MGP_PWKPhJ_G0034317
 protein coding gene ChrX:20082860-20093451 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034158
 protein coding gene ChrX:21112779-21121203 (-)
WSB/EiJ MGP_WSBEiJ_G0034751
 protein coding gene ChrX:31930998-31939924 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    5
  • cDNA Data
    2
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 385343 NCBI Gene Model | MGI Sequence Detail 8455 C57BL/6J ±  kb
transcript NM_001025084 RefSeq | MGI Sequence Detail 883 C57BL/6  
polypeptide NP_001020255 RefSeq | MGI Sequence Detail 224 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 21
    Developmental Gene Expression 4
    Phenotypes 7
  • Earliest
    J:96937 Maclean JA 2nd, et al., Rhox: a new homeobox gene cluster. Cell. 2005 Feb 11;120(3):369-82
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory