Dgkeos Gene Detail

Summary

• Symbol
  Dgkeos
• Name
  diacylglycerol kinase, epsilon, opposite strand
• Synonyms
  A930013B10Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3041185
  NCBI Gene: 414094
• Alliance
  genome feature page
• Transcription Start Sites
  12 TSS

Location &
Maps

• Sequence Map
  Chr11:88951577-88958710 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 54.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3041185	antisense lncRNA gene	Chr11:88950990-88959929 (+)
129S1/SvImJ	ENSMUSG00200020362	lncRNA gene	Chr11:86094946-86099284 (+)
129S1/SvImJ	ENSMUSG00200020204	protein coding gene	Chr11:86090673-86104084 (+)
A/J	ENSMUSG00195008014	protein coding gene	Chr11:85945700-85959109 (+)
A/J	ENSMUSG00195009498	lncRNA gene	Chr11:85949973-85954307 (+)
AKR/J	ENSMUSG00220012205	lncRNA gene	Chr11:86149685-86154019 (+)
AKR/J	ENSMUSG00220011178	protein coding gene	Chr11:86145412-86158822 (+)
BALB/cJ	ENSMUSG00180011803	lncRNA gene	Chr11:86150662-86155016 (+)
BALB/cJ	ENSMUSG00180011134	protein coding gene	Chr11:86146391-86159820 (+)
C3H/HeJ	ENSMUSG00175029184	protein coding gene	Chr11:86092130-86105535 (+)
C3H/HeJ	ENSMUSG00175033122	lncRNA gene	Chr11:86096401-86100737 (+)
C57BL/6NJ	ENSMUSG00215029480	lncRNA gene	Chr11:85763250-85767631 (+)
C57BL/6NJ	ENSMUSG00215023389	protein coding gene	Chr11:85758970-85772496 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002680	antisense lncRNA gene	Chr11:84316751-84321086 (+)
CAST/EiJ	ENSTCUG00005017271	lncRNA gene	Chr11:85668964-85673331 (+)
CBA/J	ENSMUSG00210031751	protein coding gene	Chr11:85909683-85923092 (+)
CBA/J	ENSMUSG00210039803	lncRNA gene	Chr11:85913956-85918292 (+)
DBA/2J	ENSMUSG00185017335	protein coding gene	Chr11:86225890-86239294 (+)
DBA/2J	ENSMUSG00185020370	lncRNA gene	Chr11:86230163-86234495 (+)
FVB/NJ	ENSMUSG00205024443	lncRNA gene	Chr11:86109732-86114060 (+)
FVB/NJ	ENSMUSG00205018953	protein coding gene	Chr11:86105459-86118861 (+)
JF1/MsJ	ENSUMUG00000029958	lncRNA gene	Chr11:86558709-86563113 (+)
LP/J	ENSMUSG00230024062	protein coding gene	Chr11:87259566-87272971 (+)
NOD/ShiLtJ	ENSMUSG00190017365	protein coding gene	Chr11:86257691-86271092 (+)
NOD/ShiLtJ	ENSMUSG00190020529	lncRNA gene	Chr11:86261964-86266296 (+)
NZO/HlLtJ	ENSMUSG00225037789	protein coding gene	Chr11:89367200-89380599 (+)
PWK/PhJ	ENSLUMG00010035730	lncRNA gene	Chr11:86097056-86101521 (+)
SPRET/EiJ	ENSMSPG00010028333	lncRNA gene	Chr11:86509814-86514323 (+)
WSB/EiJ	ENSIUOG00005008274	lncRNA gene	Chr11:86083868-86088216 (+)

Homology

• Gene Tree
  Dgkeos
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  32
• Chemically induced (other)
  1
• Gene trapped
  28
• Targeted
  3
• Genomic Mutations
  4 involving Dgkeos
• Find Mice (IMSR)
  18 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  9

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  50
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000063109 (Evidence)
• NCBI Gene
  414094

Representative Sequences			Length	Strain/Species
genomic	414094	NCBI Gene Model | MGI Sequence Detail	7134	C57BL/6J
transcript	NR_110336	RefSeq | MGI Sequence Detail	770	C57BL/6
polypeptide	Q8C8U9	UniProt | EBI | MGI Sequence Detail	147	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 9

  cDNA 9

  
  

  Microarray probesets 2

References

• Summaries
  All 26

  Diseases 1

  Phenotypes 12
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Dgkeos:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr104075	Chr11:88951451-88951465 (+)	-119 bp
Tssr104076	Chr11:88951493-88951498 (+)	-81 bp
Tssr104077	Chr11:88951558-88951580 (+)	-8 bp
Tssr104078	Chr11:88956640-88956652 (+)	5,069 bp
Tssr104079	Chr11:88956653-88956673 (+)	5,086 bp
Tssr104080	Chr11:88956700-88956712 (+)	5,129 bp
Tssr104081	Chr11:88956830-88956847 (+)	5,262 bp
Tssr104082	Chr11:88956857-88956869 (+)	5,286 bp
Tssr104083	Chr11:88957141-88957181 (+)	5,584 bp
Tssr104084	Chr11:88957187-88957232 (+)	5,633 bp
Tssr104085	Chr11:88957238-88957254 (+)	5,669 bp
Tssr104086	Chr11:88957259-88957277 (+)	5,691 bp