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Klhl29 Gene Detail
Summary
  • Symbol
    Klhl29
  • Name
    kelch-like 29
  • Synonyms
    A230106N14Rik, Kbtbd9, mKIAA1921
  • Feature Type
    protein coding gene
  • IDs
    MGI:2683857
    NCBI Gene: 208439
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:5127472-5425682 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 2.28 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2303 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2683857
 protein coding gene Chr12:5127465-5425682 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019580
 protein coding gene Chr12:2001427-2222690 (-)
A/J MGP_AJ_G0019547
 protein coding gene Chr12:1957125-2255000 (-)
AKR/J MGP_AKRJ_G0019517
 protein coding gene Chr12:2176131-2397660 (-)
BALB/cJ MGP_BALBcJ_G0019522
 protein coding gene Chr12:2012963-2310350 (-)
C3H/HeJ MGP_C3HHeJ_G0019328
 protein coding gene Chr12:1948589-2260646 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019971
 protein coding gene Chr12:2055413-2374378 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017596
 protein coding gene Chr12:1930708-2154338 (-)
CAST/EiJ MGP_CASTEiJ_G0018883
 protein coding gene Chr12:1995666-2330352 (-)
CBA/J MGP_CBAJ_G0019299
 protein coding gene Chr12:2387265-2708965 (-)
DBA/2J MGP_DBA2J_G0019412
 protein coding gene Chr12:1897086-2113919 (-)
FVB/NJ MGP_FVBNJ_G0019403
 protein coding gene Chr12:1918035-2132813 (-)
LP/J MGP_LPJ_G0019483
 protein coding gene Chr12:2011448-2232588 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019436
 protein coding gene Chr12:2127388-2350293 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020010
 protein coding gene Chr12:1985238-2209212 (-)
PWK/PhJ MGP_PWKPhJ_G0018649
 protein coding gene Chr12:1919923-2262511 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018440
 protein coding gene Chr12:2025295-2340691 (-)
WSB/EiJ MGP_WSBEiJ_G0018934
 protein coding gene Chr12:1975708-2281203 (-)



Homology
more
  • Human Ortholog
    KLHL29, kelch like family member 29
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KLHL29, kelch like family member 29
  • Synonyms
    KBTBD9
  • Links
    NCBI Gene ID: 114818
    neXtProt AC: NX_Q96CT2
    UniProt: Q96CT2

  • Chr Location
    2p24.1; chr2:23385179-23708611 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    866
  • Tissues
    13
  • cDNA Data
    7
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020627 Ensembl Gene Model | MGI Sequence Detail 298211 C57BL/6J ±  kb
    transcript ENSMUST00000020958 Ensembl | MGI Sequence Detail 7041 Not Applicable  
    polypeptide ENSMUSP00000020958 Ensembl | MGI Sequence Detail 875 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 7
      Primer pair 1

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2684914
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 3
      Phenotypes 8
    • Earliest
      J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
    • Latest
      J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory