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Cmtr2 Gene Detail
Summary
  • Symbol
    Cmtr2
  • Name
    cap methyltransferase 2
  • Synonyms
    C730036L12Rik, Ftsjd1, MGC:38131
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384580
    NCBI Gene: 234728
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:110942297-110951118 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 57.48 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384580
 protein coding gene Chr8:110941977-110951121 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034123
 protein coding gene Chr8:112869200-112878021 (+)
A/J MGP_AJ_G0034102
 protein coding gene Chr8:108288483-108297304 (+)
AKR/J MGP_AKRJ_G0034029
 protein coding gene Chr8:111478564-111487385 (+)
BALB/cJ MGP_BALBcJ_G0034096
 protein coding gene Chr8:108488330-108497151 (+)
C3H/HeJ MGP_C3HHeJ_G0033807
 protein coding gene Chr8:112177466-112186287 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034616
 protein coding gene Chr8:116848483-116857304 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031558
 protein coding gene Chr8:101306565-101315697 (+)
CAST/EiJ MGP_CASTEiJ_G0033134
 protein coding gene Chr8:111786488-111795364 (+)
CBA/J MGP_CBAJ_G0033781
 protein coding gene Chr8:120783237-120792058 (+)
DBA/2J MGP_DBA2J_G0033936
 protein coding gene Chr8:107604486-107613307 (+)
FVB/NJ MGP_FVBNJ_G0033880
 protein coding gene Chr8:106554792-106563613 (+)
LP/J MGP_LPJ_G0034026
 protein coding gene Chr8:113049477-113058298 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033926
 protein coding gene Chr8:123766013-123774834 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034635
 protein coding gene Chr8:111430105-111438926 (+)
PWK/PhJ MGP_PWKPhJ_G0032837
 protein coding gene Chr8:107174782-107183619 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032676
 protein coding gene Chr8:110115638-110124531 (+)
WSB/EiJ MGP_WSBEiJ_G0033250
 protein coding gene Chr8:112113315-112122136 (+)



Homology
more
  • Human Ortholog
    CMTR2, cap methyltransferase 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CMTR2, cap methyltransferase 2
  • Synonyms
    AFT, FTSJD1, HMTr2, MTr2
  • Links
    NCBI Gene ID: 55783
    neXtProt AC: NX_Q8IYT2
    UniProt: Q8IYT2

  • Chr Location
    16q22.2; chr16:71282300-71290178 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    756
  • Tissues
    43
  • cDNA Data
    9
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000046441 Ensembl Gene Model | MGI Sequence Detail 8822 C57BL/6J ±  kb
    transcript ENSMUST00000056972 Ensembl | MGI Sequence Detail 3545 Not Applicable  
    polypeptide ENSMUSP00000060558 Ensembl | MGI Sequence Detail 767 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000030551 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2
      (term hierarchy)
    • EC
      2.1.1.296
    • InterPro Domains
      IPR025807 Adrift-type ribose 2-O-methyltransferase domain
      IPR002877 Ribosomal RNA methyltransferase, FtsJ domain
      IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
    Molecular
    Reagents
    less
    • All nucleic 9
      cDNA 9

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2142707, MGI:2443150
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 6
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    03/14/2023
    MGI 6.22     		The Jackson Laboratory