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AU040972 Gene Detail
Summary
  • Symbol
    AU040972
  • Name
    expressed sequence AU040972
Location &
Maps
more
  • Sequence Map
    Chr11:79372549-79374857 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 46.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    124 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144426
 lncRNA gene Chr11:79372448-79374857 (-)
129S1/SvImJ ENSMUSG00200052130
 lncRNA gene Chr11:76489505-76491817 (-)
A/J ENSMUSG00195045222
 lncRNA gene Chr11:76368386-76370698 (-)
AKR/J ENSMUSG00220049138
 lncRNA gene Chr11:76598990-76601296 (-)
BALB/cJ ENSMUSG00180045063
 lncRNA gene Chr11:76563812-76566118 (-)
C3H/HeJ ENSMUSG00175042039
 lncRNA gene Chr11:76533062-76535368 (-)
C57BL/6NJ ENSMUSG00215042299
 lncRNA gene Chr11:76150326-76152638 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002660
 antisense lncRNA gene Chr11:74433044-74435377 (-)
CAST/EiJ ENSTCUG00005046185
 lncRNA gene Chr11:76055969-76058281 (-)
CBA/J ENSMUSG00210048321
 lncRNA gene Chr11:76356700-76359006 (-)
DBA/2J ENSMUSG00185041999
 lncRNA gene Chr11:76614815-76617127 (-)
FVB/NJ ENSMUSG00205048259
 lncRNA gene Chr11:76452759-76455071 (-)
JF1/MsJ ENSUMUG00000052534
 lncRNA gene Chr11:77003068-77005398 (-)
LP/J ENSMUSG00230049764
 lncRNA gene Chr11:77645126-77647438 (-)
NOD/ShiLtJ ENSMUSG00190047835
 lncRNA gene Chr11:76661759-76664071 (-)
NZO/HlLtJ ENSMUSG00225039490
 lncRNA gene Chr11:79812642-79814954 (-)
PWK/PhJ ENSLUMG00010026643
 lncRNA gene Chr11:76526637-76528967 (-)
SPRET/EiJ ENSMSPG00010043552
 lncRNA gene Chr11:76929403-76931706 (-)
WSB/EiJ ENSIUOG00005038012
 lncRNA gene Chr11:76503408-76505714 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    7
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 104522 NCBI Gene Model | MGI Sequence Detail 2309 C57BL/6J ±  kb
transcript NR_045305 RefSeq | MGI Sequence Detail 1038 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
Other
Accession IDs
less
MGI:2144425
References
more
  • Summaries
    All 21
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory