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Glt6d2 Gene Detail
Summary
  • Symbol
    Glt6d2
  • Name
    glycosyltransferase 6 domain containing 2
  • Synonyms
    4930402F06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922104
    NCBI Gene: 74854
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:35265574-35287187 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 23.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    757 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922104
 protein coding gene Chr2:35265483-35287217 (-)
129S1/SvImJ ENSMUSG00200045219
 protein coding gene Chr2:32245268-32266879 (-)
A/J ENSMUSG00195035217
 protein coding gene Chr2:32347291-32368917 (-)
AKR/J ENSMUSG00220044397
 protein coding gene Chr2:32462230-32483852 (-)
BALB/cJ ENSMUSG00180048236
 protein coding gene Chr2:32361673-32383284 (-)
C3H/HeJ ENSMUSG00175042466
 protein coding gene Chr2:32328016-32349628 (-)
C57BL/6NJ ENSMUSG00215046125
 protein coding gene Chr2:32395143-32416763 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023481
 protein coding gene Chr2:31252614-31275388 (-)
CAST/EiJ ENSTCUG00005016747
 protein coding gene Chr2:32060002-32082712 (-)
CBA/J ENSMUSG00210048752
 protein coding gene Chr2:32400324-32421940 (-)
DBA/2J ENSMUSG00185045199
 protein coding gene Chr2:32260160-32281784 (-)
FVB/NJ ENSMUSG00205034278
 protein coding gene Chr2:32108019-32129633 (-)
JF1/MsJ ENSUMUG00000007400
 protein coding gene Chr2:32150675-32173334 (-)
LP/J ENSMUSG00230045464
 protein coding gene Chr2:34180615-34202227 (-)
NOD/ShiLtJ ENSMUSG00190038112
 protein coding gene Chr2:32361486-32383097 (-)
NZO/HlLtJ ENSMUSG00225049791
 protein coding gene Chr2:41936977-41957999 (-)
PWK/PhJ ENSLUMG00010041922
 protein coding gene Chr2:32244909-32267448 (-)
SPRET/EiJ ENSMSPG00010038252
 protein coding gene Chr2:32950395-32980326 (-)
WSB/EiJ ENSIUOG00005036409
 protein coding gene Chr2:32233543-32255993 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    3 phenotype references
Male mice exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079421 Ensembl Gene Model | MGI Sequence Detail 21614 C57BL/6J ±  kb
transcript ENSMUST00000113010 Ensembl | MGI Sequence Detail 1372 Not Applicable  
polypeptide ENSMUSP00000108633 Ensembl | MGI Sequence Detail 332 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR005076 Glycosyl transferase, family 6
    IPR029044 Nucleotide-diphospho-sugar transferases
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:8352249
References
more
  • Summaries
    All 22
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:296968 Park S, et al., CRISPR/Cas9-mediated genome-edited mice reveal 10 testis-enriched genes are dispensable for male fecundity. Biol Reprod. 2020 Aug 4;103(2):195-204
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory