early conceptus |
embryo ectoderm |
embryo endoderm |
embryo mesoderm |
embryo mesenchyme |
extraembryonic component |
alimentary system |
auditory system |
branchial arches |
cardiovascular system |
connective tissue |
endocrine system |
exocrine system |
hemolymphoid system |
integumental system |
limbs |
liver and biliary system |
musculoskeletal system |
nervous system |
olfactory system |
reproductive system |
respiratory system |
urinary system |
visual system |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Transcription Start Site | Location | Distance from Gene 5'-end |
Tssr40462 | Chr4:151004030-151004033 (+) | -580 bp |
Tssr40463 | Chr4:151004611-151004654 (+) | 21 bp |
Tssr40464 | Chr4:151009111-151009121 (+) | 4,504 bp |
Tssr40465 | Chr4:151011763-151011785 (+) | 7,162 bp |
Tssr40466 | Chr4:151012476-151012492 (+) | 7,872 bp |
Tssr40467 | Chr4:151014152-151014165 (+) | 9,547 bp |
Tssr40468 | Chr4:151014167-151014214 (+) | 9,579 bp |
Tssr40469 | Chr4:151016839-151016850 (+) | 12,233 bp |
Tssr40470 | Chr4:151020199-151020212 (+) | 15,594 bp |
Tssr40471 | Chr4:151029444-151029457 (+) | 24,839 bp |
Tssr40472 | Chr4:151029788-151029794 (+) | 25,179 bp |
QTL | Genetic Location* | Genome Location (GRCm39) | Reference | QTL Note |
Alcw2 | Chr4, syntenic | Chr4:75859474-81361052 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 4, several candidate genes were identified for Ap3q at 81 cM and Alcw2 at 40 cM. Candidate genes for Ap3q are Clic4, 2610510H01Rik, Park7, and Tnfrsf9 (75.5 cM). Candidate genes for Alcw2 are Mpdz (38.6 cM) and Nfib (38.6 cM). |
Ap3q | Chr4, 82.64 cM | Chr4:151654451-151654550 | J:98595 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states. On mouse Chromosome 4, several candidate genes were identified for Ap3q at 81 cM and Alcw2 at 40 cM. Candidate genes for Ap3q are Clic4, 2610510H01Rik, Park7, and Tnfrsf9 (75.5 cM). Candidate genes for Alcw2 are Mpdz (38.6 cM) and Nfib (38.6 cM). |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 11/19/2024 MGI 6.24 |
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