Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YAF2
  • Mouse genes Yaf2
  • Rat genes Yaf2
  • Zfish genes yaf2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Yaf2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:P04198	Human	PMID:11593398
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:P01106	Human	PMID:12706874
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q06587	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q06587	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q06587	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q9HD64	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q9Y6X0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:Q06587	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	YAF2	IPI	UniProtKB:P25490	Human	PMID:9016636
Molecular Function	GO:0005515	protein binding	Yaf2	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:2679146|PMID:14557078
Molecular Function	GO:0005515	protein binding	Yaf2	IPI	PR:Q00899	Mouse	PMID:21530438
Molecular Function	GO:0005515	protein binding	Yaf2	IPI	PR:P22227	Mouse	PMID:21530438
Molecular Function	GO:0003713	transcription coactivator activity	YAF2	IDA		Human	PMID:11593398
Molecular Function	GO:0003714	transcription corepressor activity	YAF2	IDA		Human	PMID:12706874
Cellular Component	GO:0005829	cytosol	YAF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	YAF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	YAF2	IDA		Human	PMID:11593398
Cellular Component	GO:0005634	nucleus	Yaf2	IDA		Mouse	PMID:14557078
Biological Process	GO:0030900	forebrain development	yaf2	IMP	ZFIN:ZDB-MRPHLNO-061030-2	Zfish	PMID:16891308
Biological Process	GO:0030900	forebrain development	yaf2	IMP	ZFIN:ZDB-MRPHLNO-061030-1	Zfish	PMID:16891308
Biological Process	GO:0043066	negative regulation of apoptotic process	yaf2	IMP	ZFIN:ZDB-MRPHLNO-061030-1	Zfish	PMID:16891308
Biological Process	GO:0043066	negative regulation of apoptotic process	yaf2	IMP	ZFIN:ZDB-MRPHLNO-061030-2	Zfish	PMID:16891308
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	YAF2	IDA		Human	PMID:12706874
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	YAF2	IDA		Human	PMID:11593398

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern