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Yaf2 Gene Detail
Summary
  • Symbol
    Yaf2
  • Name
    YY1 associated factor 2
  • Synonyms
    2810021M11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914307
    NCBI Gene: 67057
  • Gene Overview
    MyGene.info: YAF2
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:93284278-93336935 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 47.39 cM, cytoband F1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    229 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914307
protein coding gene Chr15:93283833-93336935 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022254
protein coding gene Chr15:94688349-94744526 (-)
A/J MGP_AJ_G0022213
protein coding gene Chr15:91029684-91083557 (-)
AKR/J MGP_AKRJ_G0022188
protein coding gene Chr15:93747416-93807677 (-)
BALB/cJ MGP_BALBcJ_G0022219
protein coding gene Chr15:91151118-91204017 (-)
C3H/HeJ MGP_C3HHeJ_G0021989
protein coding gene Chr15:93758681-93813807 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022664
protein coding gene Chr15:98145502-98204682 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020190
protein coding gene Chr15:87071251-87127432 (-)
CAST/EiJ MGP_CASTEiJ_G0021511
protein coding gene Chr15:94573508-94636536 (-)
CBA/J MGP_CBAJ_G0021956
protein coding gene Chr15:101473166-101532178 (-)
DBA/2J MGP_DBA2J_G0022083
protein coding gene Chr15:90460435-90513208 (-)
FVB/NJ MGP_FVBNJ_G0022062
protein coding gene Chr15:89482672-89535953 (-)
LP/J MGP_LPJ_G0022154
protein coding gene Chr15:94799077-94859315 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022082
protein coding gene Chr15:105827136-105883911 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022679
protein coding gene Chr15:93829236-93884272 (-)
PWK/PhJ MGP_PWKPhJ_G0021252
protein coding gene Chr15:90510027-90564416 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021086
protein coding gene Chr15:93571046-93629613 (-)
WSB/EiJ MGP_WSBEiJ_G0021560
protein coding gene Chr15:94324461-94382952 (-)



Homology
more
  • Human Ortholog
    YAF2, YY1 associated factor 2
  • Vertebrate Orthologs
    6
  • Human Ortholog
    YAF2, YY1 associated factor 2
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 10138
    neXtProt AC: NX_Q8IY57
    UniProt: Q8IY57

  • Chr Location
    12q12; chr12:42157104-42238368 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022634 Ensembl Gene Model | MGI Sequence Detail 52658 C57BL/6J ±  kb
transcript ENSMUST00000080299 Ensembl | MGI Sequence Detail 1676 Not Applicable  
polypeptide ENSMUSP00000079179 Ensembl | MGI Sequence Detail 179 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 59
    cDNA 57
    Primer pair 2

    Microarray probesets 4
References
more
  • Summaries
    All 54
    Developmental Gene Expression 7
    Diseases 1
    Gene Ontology 4
    Phenotypes 21
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:238637 Rose NR, et al., RYBP stimulates PRC1 to shape chromatin-based communication between Polycomb repressive complexes. Elife. 2016 Oct 05;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory