Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes XYLT2
  • Mouse genes Xylt2
  • Rat genes Xylt2
  • Zfish genes xylt2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Xylt2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000287	magnesium ion binding	XYLT2	IDA		Human	PMID:18023272
Molecular Function	GO:0030145	manganese ion binding	XYLT2	IDA		Human	PMID:18023272
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT2	IDA		Human	PMID:17189265
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT2	IDA		Human	PMID:18023272
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT2	IDA		Human	PMID:25748573
Molecular Function	GO:0030158	protein xylosyltransferase activity	Xylt2	IMP	MGI:MGI:3714171	Mouse	PMID:19389916
Molecular Function	GO:0030158	protein xylosyltransferase activity	Xylt2	IDA		Mouse	PMID:19389916
Cellular Component	GO:0005615	extracellular space	XYLT2	IDA		Human	PMID:25748573
Biological Process	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process	XYLT2	IMP		Human	PMID:17189265
Biological Process	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process	XYLT2	IMP		Human	PMID:26027496
Biological Process	GO:0006024	glycosaminoglycan biosynthetic process	Xylt2	IMP	MGI:MGI:3714171	Mouse	PMID:17517600
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	XYLT2	IMP		Human	PMID:17189265
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	XYLT2	IMP		Human	PMID:26027496
Biological Process	GO:0030210	heparin biosynthetic process	Xylt2	IMP	MGI:MGI:3714171	Mouse	PMID:17517600
Biological Process	GO:0030166	proteoglycan biosynthetic process	Xylt2	IMP	MGI:MGI:3714171	Mouse	PMID:17517600

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern