Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TSN
  • Mouse genes Tsn
  • Rat genes Tsn
  • Zfish genes tsn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tsn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TSN	IPI	UniProtKB:Q15631	Human	PMID:21988832
Molecular Function	GO:0042802	identical protein binding	TSN	IPI	UniProtKB:Q15631	Human	PMID:32296183
Molecular Function	GO:0003729	mRNA binding	Tsn	IDA		Mouse	PMID:15987823
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q99598	Human	PMID:21552258
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q14161	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q99598	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q99598	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:P61086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q15014	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q7KZS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q92997	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q99598	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TSN	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tsn	IPI	PR:Q9QZE7	Mouse	PMID:12036294
Molecular Function	GO:0005515	protein binding	Tsn	IPI	PR:Q9QZE7	Mouse	PMID:11278549
Molecular Function	GO:0044877	protein-containing complex binding	Tsn	IDA		Rat	PMID:9681436|RGD:634412
Molecular Function	GO:0003723	RNA binding	Tsn	IDA		Mouse	PMID:15987823
Molecular Function	GO:0003723	RNA binding	Tsn	IDA		Mouse	PMID:11278549
Molecular Function	GO:0043565	sequence-specific DNA binding	Tsn	IDA		Rat	PMID:9681436|RGD:634412
Molecular Function	GO:0003697	single-stranded DNA binding	Tsn	IDA		Rat	PMID:9681436|RGD:634412
Cellular Component	GO:0005737	cytoplasm	Tsn	IDA		Mouse	PMID:11278549
Cellular Component	GO:0005737	cytoplasm	Tsn	IDA		Mouse	PMID:15987823
Cellular Component	GO:0005783	endoplasmic reticulum	TSN	IDA		Human	GO_REF:0000052
Cellular Component	GO:1902555	endoribonuclease complex	TSN	IPI		Human	PMID:21552258
Cellular Component	GO:0001673	male germ cell nucleus	Tsn	IDA		Mouse	PMID:15987823
Cellular Component	GO:0005654	nucleoplasm	TSN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Tsn	IDA		Mouse	PMID:11278549
Biological Process	GO:0030422	siRNA processing	TSN	IDA		Human	PMID:21552258

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern