Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TREML1
  • Mouse genes Treml1
  • Rat genes Treml1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Treml1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TREML1	IPI	UniProtKB:P55061	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Treml1	IPI	PR:P97797	Mouse	PMID:12393607
Cellular Component	GO:0009986	cell surface	Treml1	IDA		Mouse	MGI:MGI:3054162|PMID:15100151
Cellular Component	GO:0005829	cytosol	TREML1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	TREML1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	TREML1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TREML1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031091	platelet alpha granule	Treml1	IDA		Mouse	MGI:MGI:3054162|PMID:15100151
Biological Process	GO:0030168	platelet activation	Treml1	IEP		Mouse	MGI:MGI:3054162|PMID:15100151

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern