Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TCTN1
  • Mouse genes Tctn1
  • Rat genes Tctn1
  • Zfish genes tctn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tctn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	UniProtKB:Q5SW45	Mouse	MGI:MGI:5013991|PMID:21565611
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q9R1S0	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q922M3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q3U284	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q3UK10	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q5SW45	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q2MV57	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q8CFW7	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q8K3E5	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Tctn1	IPI	PR:Q8K0U3	Mouse	PMID:22179047
Cellular Component	GO:0035869	ciliary transition zone	Tctn1	IMP		Mouse	MGI:MGI:5288576|PMID:21725307
Cellular Component	GO:0005615	extracellular space	Tctn1	IDA		Mouse	PMID:16357211
Cellular Component	GO:0016020	membrane	Tctn1	IDA		Mouse	PMID:22179047
Cellular Component	GO:0036038	MKS complex	Tctn1	IDA		Mouse	MGI:MGI:5288576|PMID:21725307
Cellular Component	GO:0036038	MKS complex	Tctn1	IDA		Mouse	PMID:22179047
Biological Process	GO:0021956	central nervous system interneuron axonogenesis	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:0060271	cilium assembly	Tctn1	IMP		Mouse	MGI:MGI:5288576|PMID:21725307
Biological Process	GO:0021904	dorsal/ventral neural tube patterning	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:0001701	in utero embryonic development	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:0001841	neural tube formation	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:1904491	protein localization to ciliary transition zone	Tctn1	IMP		Mouse	MGI:MGI:5770161|PMID:26982032
Biological Process	GO:0008589	regulation of smoothened signaling pathway	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:0021523	somatic motor neuron differentiation	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211
Biological Process	GO:0021537	telencephalon development	Tctn1	IMP	MGI:MGI:3716885	Mouse	PMID:16357211

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern