Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYN3
  • Mouse genes Syn3
  • Rat genes Syn3
  • Zfish genes syn3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Syn3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005524	ATP binding	Syn3	IDA		Rat	PMID:9593663|RGD:70029
Molecular Function	GO:0005515	protein binding	Syn3	IPI	UniProtKB:O54960	Rat	PMID:11867766|RGD:8553593
Molecular Function	GO:0005515	protein binding	Syn3	IPI	UniProtKB:P61765	Rat	PMID:17442889|RGD:2312426
Cellular Component	GO:0098850	extrinsic component of synaptic vesicle membrane	Syn3	EXP		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0098850	extrinsic component of synaptic vesicle membrane	Syn3	IDA		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0098850	extrinsic component of synaptic vesicle membrane	Syn3	IDA		Rat	PMID:9539796|RGD:13702156
Cellular Component	GO:0098978	glutamatergic synapse	Syn3	IDA		Mouse	PMID:12040043
Cellular Component	GO:0098978	glutamatergic synapse	Syn3	IMP		Mouse	PMID:12040043
Cellular Component	GO:0014069	postsynaptic density	Syn3	IDA		Mouse	PMID:17114649
Cellular Component	GO:0098793	presynapse	Syn3	IMP		Mouse	MGI:MGI:2180939|PMID:12040043
Cellular Component	GO:0045202	synapse	Syn3	IMP		Mouse	MGI:MGI:2180939|PMID:12040043
Cellular Component	GO:0045202	synapse	Syn3	IDA		Mouse	PMID:15071120
Cellular Component	GO:0008021	synaptic vesicle	Syn3	IDA		Rat	PMID:11867766|RGD:8553593
Cellular Component	GO:0030672	synaptic vesicle membrane	Syn3	IDA		Mouse	PMID:15071120
Biological Process	GO:0097091	synaptic vesicle clustering	Syn3	IDA		Mouse	PMID:12040043
Biological Process	GO:0097091	synaptic vesicle clustering	Syn3	IMP		Mouse	PMID:12040043
Biological Process	GO:0099504	synaptic vesicle cycle	Syn3	IDA		Mouse	PMID:12040043
Biological Process	GO:0099504	synaptic vesicle cycle	Syn3	IMP		Mouse	PMID:12040043

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern