Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Stx1b

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes STX1B
- Mouse genes Stx1b
- Rat genes Stx1b
- Zfish genes stx1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stx1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:O15155	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:O15554	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:O95183	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:O95721	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:O95870	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P02671-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P23763-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P32856-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P40222	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:P63027	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q12846	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q5SQN1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q5T8D3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q7KZS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q8N4V1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q8TBF8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q8TDT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q96MY7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q9H115	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q9NRX6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q9NVF7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STX1B	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Stx1b	IPI	UniProtKB:Q9R0N6\|UniProtKB:Q9R0N8	Mouse	MGI:MGI:3584221\|PMID:15774481
Molecular Function	GO:0005515	protein binding	Stx1b	IPI	UniProtKB:P61765	Rat	PMID:12093152\|RGD:730238
Molecular Function	GO:0005515	protein binding	Stx1b	IPI	UniProtKB:Q8CJB9	Rat	PMID:12121982\|RGD:633892
Molecular Function	GO:0019904	protein domain specific binding	Stx1b	IPI	RGD:619722	Rat	PMID:8999968\|RGD:2311135
Molecular Function	GO:0019901	protein kinase binding	Stx1b	IPI	UniProtKB:Q5S007	Mouse	MGI:MGI:4941068\|PMID:21307259
Molecular Function	GO:0005102	signaling receptor binding	Stx1b	IPI	UniProtKB:P11881\|UniProtKB:P70227\|UniProtKB:Q9Z329	Mouse	MGI:MGI:5796262\|PMID:21424589
Molecular Function	GO:0005102	signaling receptor binding	Stx1b	IPI	UniProtKB:P29994	Rat	PMID:21424589\|RGD:11535091
Molecular Function	GO:0005102	signaling receptor binding	Stx1b	IPI	UniProtKB:Q63269	Rat	PMID:21424589\|RGD:11535091
Cellular Component	GO:0030424	axon	Stx1b	IDA		Mouse	MGI:MGI:5819336\|PMID:23821748
Cellular Component	GO:0016020	membrane	Stx1b	IDA		Mouse	PMID:10468580
Cellular Component	GO:0031594	neuromuscular junction	Stx1b	IDA		Mouse	PMID:24587181
Cellular Component	GO:0031594	neuromuscular junction	Stx1b	IMP		Mouse	PMID:24587181
Cellular Component	GO:0031594	neuromuscular junction	Stx1b	IEP		Mouse	PMID:24587181
Cellular Component	GO:0005886	plasma membrane	Stx1b	IMP		Mouse	MGI:MGI:5521403\|PMID:24133272
Cellular Component	GO:0098793	presynapse	Stx1b	IMP		Mouse	MGI:MGI:3803800\|PMID:18703708
Cellular Component	GO:0048787	presynaptic active zone membrane	Stx1b	IDA		Rat	PMID:11331586\|RGD:68723
Cellular Component	GO:0042734	presynaptic membrane	Stx1b	IDA		Rat	PMID:12093152\|RGD:730238
Biological Process	GO:0048791	calcium ion-regulated exocytosis of neurotransmitter	Stx1b	IMP		Mouse	MGI:MGI:3803800\|PMID:18703708
Biological Process	GO:0098967	exocytic insertion of neurotransmitter receptor to postsynaptic membrane	Stx1b	IMP		Rat	PMID:26839408\|RGD:12050145
Biological Process	GO:1903422	negative regulation of synaptic vesicle recycling	Stx1b	IMP		Mouse	MGI:MGI:5603022\|PMID:24587181
Biological Process	GO:2000463	positive regulation of excitatory postsynaptic potential	Stx1b	IGI	UniProtKB:O35526	Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:0001956	positive regulation of neurotransmitter secretion	Stx1b	IGI	UniProtKB:O35526	Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:1904050	positive regulation of spontaneous neurotransmitter secretion	Stx1b	IMP		Mouse	MGI:MGI:5603022\|PMID:24587181
Biological Process	GO:0072657	protein localization to membrane	Stx1b	IDA		Rat	PMID:12093152\|RGD:730238
Biological Process	GO:0015031	protein transport	Stx1b	IMP		Rat	PMID:11245593\|RGD:2306548
Biological Process	GO:0017157	regulation of exocytosis	Stx1b	IMP		Rat	PMID:11245593\|RGD:2306548
Biological Process	GO:0010468	regulation of gene expression	Stx1b	IMP		Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:0060025	regulation of synaptic activity	stx1b	IMP		Zfish	PMID:25362483\|ZFIN:ZDB-PUB-141105-10
Biological Process	GO:0010807	regulation of synaptic vesicle priming	Stx1b	IGI	UniProtKB:O35526	Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:0061669	spontaneous neurotransmitter secretion	Stx1b	IMP		Mouse	MGI:MGI:3803800\|PMID:18703708
Biological Process	GO:0061669	spontaneous neurotransmitter secretion	Stx1b	IGI	UniProtKB:O35526	Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:0016081	synaptic vesicle docking	Stx1b	IGI	UniProtKB:O35526	Mouse	MGI:MGI:5521403\|PMID:24133272
Biological Process	GO:0016081	synaptic vesicle docking	Stx1b	IMP		Mouse	MGI:MGI:5603022\|PMID:24587181
Biological Process	GO:0016079	synaptic vesicle exocytosis	Stx1b	IDA		Mouse	PMID:27466336
Biological Process	GO:0016079	synaptic vesicle exocytosis	Stx1b	IMP		Mouse	PMID:27466336
Biological Process	GO:0031629	synaptic vesicle fusion to presynaptic active zone membrane	Stx1b	IMP		Mouse	MGI:MGI:3803800\|PMID:18703708
Biological Process	GO:0031629	synaptic vesicle fusion to presynaptic active zone membrane	Stx1b	IDA		Mouse	PMID:24587181
Biological Process	GO:0031629	synaptic vesicle fusion to presynaptic active zone membrane	Stx1b	IEP		Mouse	PMID:24587181
Biological Process	GO:0031629	synaptic vesicle fusion to presynaptic active zone membrane	Stx1b	IMP		Mouse	PMID:24587181
Biological Process	GO:0006904	vesicle docking involved in exocytosis	Stx1b	IMP		Mouse	MGI:MGI:3803800\|PMID:18703708
Biological Process	GO:0016192	vesicle-mediated transport	Stx1b	IMP		Rat	PMID:11245593\|RGD:2306548

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/23/2024 MGI 6.23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.