Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STOML3
  • Mouse genes Stoml3
  • Rat genes Stoml3
  • Zfish genes stoml3a,stoml3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stoml3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:O00526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:Q08AM2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:Q6UX98	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:Q8N5M9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:Q8N6F1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STOML3	IPI	UniProtKB:Q96IW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	UniProtKB:Q8CD54	Mouse	MGI:MGI:5582997|PMID:24662763
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	PR:Q8VHH7	Mouse	PMID:12122055
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	PR:P49817	Mouse	PMID:12122055
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	UniProtKB:O35240	Rat	PMID:17167420|RGD:13432298
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	UniProtKB:Q62962-1	Rat	PMID:17167420|RGD:13432298
Molecular Function	GO:0005515	protein binding	Stoml3	IPI	UniProtKB:Q62962-2	Rat	PMID:17167420|RGD:13432298
Cellular Component	GO:0005929	cilium	Stoml3	IDA		Mouse	PMID:21646512
Cellular Component	GO:0045121	membrane raft	Stoml3	IDA		Mouse	PMID:12122055
Cellular Component	GO:0043005	neuron projection	Stoml3	IDA		Mouse	PMID:21646512
Biological Process	GO:0007165	signal transduction	Stoml3	IDA		Mouse	PMID:12122055

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern