Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNRNP200
  • Mouse genes Snrnp200
  • Rat genes Snrnp200
  • Zfish genes snrnp200
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snrnp200

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004386	helicase activity	SNRNP200	IDA		Human	PMID:9539711
Molecular Function	GO:0042802	identical protein binding	SNRNP200	IPI	UniProtKB:O75643	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:O43290	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:O94906	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q6P2Q9	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q7LBR1	Human	PMID:16730941
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:P52756	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:O15541	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:P52298,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:O94906	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q96DI7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:O75554	Human	PMID:28838205
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q14749	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q9NZ63	Human	PMID:35241646
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q6P2Q9	Human	PMID:9774689
Molecular Function	GO:0005515	protein binding	SNRNP200	IPI	UniProtKB:Q96DI7	Human	PMID:9774689
Molecular Function	GO:0003723	RNA binding	SNRNP200	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SNRNP200	HDA		Human	PMID:22681889
Molecular Function	GO:0003724	RNA helicase activity	SNRNP200	IDA		Human	PMID:23045696
Molecular Function	GO:0003724	RNA helicase activity	SNRNP200	IDA		Human	PMID:35241646
Cellular Component	GO:0071013	catalytic step 2 spliceosome	SNRNP200	IDA		Human	PMID:11991638
Cellular Component	GO:0016020	membrane	SNRNP200	HDA		Human	PMID:16210410
Cellular Component	GO:0005654	nucleoplasm	SNRNP200	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SNRNP200	IDA		Human	PMID:22720776
Cellular Component	GO:0005634	nucleus	SNRNP200	IDA		Human	PMID:29301961
Cellular Component	GO:0005681	spliceosomal complex	SNRNP200	IDA		Human	PMID:8670905
Cellular Component	GO:0071006	U2-type catalytic step 1 spliceosome	SNRNP200	IDA		Human	PMID:29301961
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	SNRNP200	IDA		Human	PMID:29361316
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	SNRNP200	IPI		Human	PMID:30975767
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	SNRNP200	IDA		Human	PMID:23793891
Cellular Component	GO:0005682	U5 snRNP	SNRNP200	IDA		Human	PMID:9539711
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRNP200	IDA		Human	PMID:29301961
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRNP200	IDA		Human	PMID:8670905
Biological Process	GO:0001649	osteoblast differentiation	SNRNP200	HDA		Human	PMID:16210410
Biological Process	GO:0000388	spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)	SNRNP200	IDA		Human	PMID:35241646

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern