Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEMA4C
  • Mouse genes Sema4c
  • Rat genes Sema4c
  • Zfish genes sema4c
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sema4c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q8ND90	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q96PM5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:P08779	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:P0DPK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q8N6Y0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:Q8ND90	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:O43933	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SEMA4C	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Sema4c	IPI	UniProtKB:Q9Z0G0|UniProtKB:Q9Z2H7	Mouse	MGI:MGI:1889199|PMID:10318831
Molecular Function	GO:0005515	protein binding	Sema4c	IPI	UniProtKB:P31016	Mouse	MGI:MGI:4366711|PMID:11134026
Molecular Function	GO:0005515	protein binding	Sema4c	IPI	PR:Q62108	Mouse	PMID:15978582
Cellular Component	GO:0005615	extracellular space	SEMA4C	HDA		Human	PMID:22664934
Cellular Component	GO:0014069	postsynaptic density	Sema4c	IDA		Mouse	MGI:MGI:4366711|PMID:11134026
Cellular Component	GO:0030672	synaptic vesicle membrane	Sema4c	IDA		Mouse	MGI:MGI:4366711|PMID:11134026
Biological Process	GO:0021535	cell migration in hindbrain	Sema4c	IMP		Mouse	MGI:MGI:4881530|PMID:21122816
Biological Process	GO:0021549	cerebellum development	Sema4c	IMP		Mouse	MGI:MGI:4881530|PMID:21122816
Biological Process	GO:0042692	muscle cell differentiation	SEMA4C	IDA		Human	PMID:17498836
Biological Process	GO:0042692	muscle cell differentiation	Sema4c	IMP		Mouse	MGI:MGI:3575391|PMID:15811348
Biological Process	GO:0042692	muscle cell differentiation	Sema4c	IMP		Mouse	MGI:MGI:4361988|PMID:17498836
Biological Process	GO:0001843	neural tube closure	Sema4c	IMP		Mouse	MGI:MGI:4881530|PMID:21122816
Biological Process	GO:0032874	positive regulation of stress-activated MAPK cascade	SEMA4C	IDA		Human	PMID:17498836
Biological Process	GO:0071526	semaphorin-plexin signaling pathway	Sema4c	IMP		Mouse	MGI:MGI:4881530|PMID:21122816

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern