Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCGB1A1
  • Mouse genes Scgb1a1
  • Rat genes Scgb1a1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scgb1a1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097160	polychlorinated biphenyl binding	Scgb1a1	IPI	CHEBI:49809	Rat	PMID:7583672|RGD:5144064
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q6UX01	Human	PMID:16423471
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:P02751	Human	PMID:18243143
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q13049	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q13049	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q13049	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q13049	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q9BTV4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:P01100	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:P50440	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SCGB1A1	IPI	UniProtKB:Q00613	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	Scgb1a1	IDA		Mouse	PMID:8813084
Cellular Component	GO:0005737	cytoplasm	Scgb1a1	IDA		Rat	PMID:19380841|RGD:4143521
Cellular Component	GO:0005783	endoplasmic reticulum	Scgb1a1	IDA		Rat	PMID:8117444|RGD:5144112
Cellular Component	GO:0070062	extracellular exosome	SCGB1A1	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	SCGB1A1	IDA		Human	PMID:21805676
Cellular Component	GO:0005615	extracellular space	Scgb1a1	IDA		Rat	PMID:21787397|RGD:5144119
Cellular Component	GO:0005622	intracellular anatomical structure	Scgb1a1	IDA		Mouse	PMID:11724907
Cellular Component	GO:0005635	nuclear envelope	Scgb1a1	IDA		Rat	PMID:8117444|RGD:5144112
Cellular Component	GO:0005791	rough endoplasmic reticulum	Scgb1a1	IDA		Rat	PMID:8333547|RGD:5144115
Cellular Component	GO:0030141	secretory granule	Scgb1a1	IDA		Rat	PMID:8117444|RGD:5144112
Biological Process	GO:0032616	interleukin-13 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032616	interleukin-13 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032633	interleukin-4 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032633	interleukin-4 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032634	interleukin-5 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032634	interleukin-5 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032696	negative regulation of interleukin-13 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032696	negative regulation of interleukin-13 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032713	negative regulation of interleukin-4 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032713	negative regulation of interleukin-4 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032714	negative regulation of interleukin-5 production	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0032714	negative regulation of interleukin-5 production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0042130	negative regulation of T cell proliferation	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Scgb1a1	IMP	MGI:MGI:2386295	Mouse	PMID:15356574
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032689	negative regulation of type II interferon production	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0050727	regulation of inflammatory response	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0043488	regulation of mRNA stability	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0034097	response to cytokine	Scgb1a1	IMP		Rat	PMID:12060562|RGD:628342
Biological Process	GO:0071774	response to fibroblast growth factor	Scgb1a1	IEP		Rat	PMID:11076805|RGD:4144153
Biological Process	GO:0051384	response to glucocorticoid	Scgb1a1	IEP		Rat	PMID:9505268|RGD:4143481
Biological Process	GO:0032496	response to lipopolysaccharide	Scgb1a1	IEP		Rat	PMID:18420837|RGD:5143982
Biological Process	GO:0010033	response to organic substance	Scgb1a1	IEP		Rat	PMID:12838427|RGD:5144209
Biological Process	GO:0010193	response to ozone	Scgb1a1	IEP		Rat	PMID:9028799|RGD:5144059
Biological Process	GO:0034021	response to silicon dioxide	Scgb1a1	IEP		Rat	PMID:16369113|RGD:5144139
Biological Process	GO:0009410	response to xenobiotic stimulus	Scgb1a1	IEP		Rat	PMID:10766265|RGD:5144058
Biological Process	GO:0009410	response to xenobiotic stimulus	Scgb1a1	IEP		Rat	PMID:8117444|RGD:5144112
Biological Process	GO:0042098	T cell proliferation	Scgb1a1	IDA		Mouse	PMID:15356574
Biological Process	GO:0032609	type II interferon production	Scgb1a1	IDA		Mouse	PMID:15356574

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern