Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF152
  • Mouse genes Rnf152
  • Rat genes Rnf152
  • Zfish genes rnf152
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf152

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RNF152	IPI	UniProtKB:O95859	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF152	IPI	UniProtKB:P43628	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF152	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF152	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF152	IPI	UniProtKB:Q99732	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rnf152	IPI	UniProtKB:Q8QZS5	Mouse	MGI:MGI:6113025|PMID:29300766
Molecular Function	GO:0005515	protein binding	Rnf152	IPI	UniProtKB:O15027	Mouse	MGI:MGI:6113025|PMID:29300766
Molecular Function	GO:0031267	small GTPase binding	RNF152	IPI	UniProtKB:Q7L523	Human	PMID:25936802
Molecular Function	GO:0061630	ubiquitin protein ligase activity	RNF152	EXP		Human	PMID:25936802
Molecular Function	GO:0061630	ubiquitin protein ligase activity	RNF152	IMP		Human	PMID:25936802
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	RNF152	IDA		Human	PMID:21203937
Cellular Component	GO:0005765	lysosomal membrane	RNF152	IDA		Human	PMID:25936802
Cellular Component	GO:0005764	lysosome	RNF152	IDA		Human	PMID:21203937
Cellular Component	GO:0031090	organelle membrane	RNF152	IMP		Human	PMID:25936802
Biological Process	GO:0034198	cellular response to amino acid starvation	RNF152	IDA		Human	PMID:25936802
Biological Process	GO:0034198	cellular response to amino acid starvation	Rnf152	IDA		Mouse	MGI:MGI:5644195|PMID:25936802
Biological Process	GO:0001654	eye development	rnf152	IMP	ZFIN:ZDB-MRPHLNO-180522-1	Zfish	PMID:29276941
Biological Process	GO:0030902	hindbrain development	rnf152	IMP	ZFIN:ZDB-MRPHLNO-180522-1	Zfish	PMID:29276941
Biological Process	GO:0030917	midbrain-hindbrain boundary development	rnf152	IMP	ZFIN:ZDB-MRPHLNO-180522-1	Zfish	PMID:29276941
Biological Process	GO:1904262	negative regulation of TORC1 signaling	RNF152	IMP		Human	PMID:25936802
Biological Process	GO:1904262	negative regulation of TORC1 signaling	Rnf152	IMP		Mouse	MGI:MGI:5644195|PMID:25936802
Biological Process	GO:0010508	positive regulation of autophagy	RNF152	IMP		Human	PMID:25936802
Biological Process	GO:0010508	positive regulation of autophagy	Rnf152	IMP		Mouse	MGI:MGI:5644195|PMID:25936802
Biological Process	GO:0070936	protein K48-linked ubiquitination	RNF152	IDA		Human	PMID:21203937
Biological Process	GO:0070534	protein K63-linked ubiquitination	RNF152	IMP		Human	PMID:25936802

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern