Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB6A
  • Mouse genes Rab6a
  • Rat genes Rab6a
  • Zfish genes rab6a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab6a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001671	ATPase activator activity	Rab6a	IDA		Rat	PMID:11062069|RGD:633463
Molecular Function	GO:0051117	ATPase binding	Rab6a	IPI	RGD:621594	Rat	PMID:11062069|RGD:633463
Molecular Function	GO:0005525	GTP binding	RAB6A	IDA		Human	PMID:16332443
Molecular Function	GO:0005525	GTP binding	RAB6A	IDA		Human	PMID:18243103
Molecular Function	GO:0005525	GTP binding	RAB6A	IDA		Human	PMID:19141279
Molecular Function	GO:0005525	GTP binding	Rab6a	IDA		Rat	PMID:8807639|RGD:2306441
Molecular Function	GO:0003924	GTPase activity	RAB6A	IDA		Human	PMID:16332443
Molecular Function	GO:0003924	GTPase activity	RAB6A	IDA		Human	PMID:18243103
Molecular Function	GO:0031489	myosin V binding	RAB6A	IPI	UniProtKB:Q9Y4I1	Human	PMID:24006491
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q8IUD2	Human	PMID:12391317
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q8N1B4	Human	PMID:15878329
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q92871	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q01968	Human	PMID:16902405
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q8IWJ2	Human	PMID:18243103
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q6PAL8	Human	PMID:19141279
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q921C5	Human	PMID:20386726
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q8TCI5	Human	PMID:20643351
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q9D9W1	Human	PMID:20643351
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q01968	Human	PMID:21378754
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q4ADV7	Human	PMID:23091056
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q92546	Human	PMID:23091056
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q8TD16	Human	PMID:23664119
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q01968	Human	PMID:25107275
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q92871	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAB6A	IPI	UniProtKB:Q921C5	Human	PMID:25962623
Molecular Function	GO:0005515	protein binding	Rab6a	IPI	UniProtKB:Q8TDW5	Mouse	MGI:MGI:4942255|PMID:12051743
Molecular Function	GO:0005515	protein binding	Rab6a	IPI	UniProtKB:A0JNT9|UniProtKB:Q921C5	Mouse	MGI:MGI:4442267|PMID:20360680
Molecular Function	GO:0005515	protein binding	Rab6a	IPI	PR:Q6PAL8	Mouse	PMID:7631419
Molecular Function	GO:0005515	protein binding	Rab6a	IPI	PR:Q99MI1	Mouse	PMID:11929610
Molecular Function	GO:0005515	protein binding	Rab6a	IPI	RGD:621594	Rat	PMID:11062069|RGD:633463
Molecular Function	GO:0019904	protein domain specific binding	RAB6A	IPI	UniProtKB:Q921C5	Human	PMID:12447383
Molecular Function	GO:0019904	protein domain specific binding	RAB6A	IPI	UniProtKB:Q96G01	Human	PMID:12447383
Cellular Component	GO:0002080	acrosomal membrane	Rab6a	IDA		Mouse	MGI:MGI:6467831|PMID:31218450
Cellular Component	GO:0031410	cytoplasmic vesicle	RAB6A	IDA		Human	PMID:12447383
Cellular Component	GO:0005829	cytosol	RAB6A	IDA		Human	PMID:12447383
Cellular Component	GO:0070381	endosome to plasma membrane transport vesicle	RAB6A	IDA		Human	PMID:24859005
Cellular Component	GO:0070062	extracellular exosome	RAB6A	HDA		Human	PMID:20458337
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:11121396
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:15229288
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:17562788
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:18243103
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:19141279
Cellular Component	GO:0005794	Golgi apparatus	RAB6A	IDA		Human	PMID:23091056
Cellular Component	GO:0005794	Golgi apparatus	Rab6a	IDA		Mouse	MGI:MGI:6467831|PMID:31218450
Cellular Component	GO:0005794	Golgi apparatus	Rab6a	IDA		Mouse	PMID:11042173
Cellular Component	GO:0005794	Golgi apparatus	Rab6a	IDA		Rat	PMID:11062069|RGD:633463
Cellular Component	GO:0000139	Golgi membrane	RAB6A	IDA		Human	PMID:25962623
Cellular Component	GO:0016020	membrane	RAB6A	IDA		Human	PMID:12447383
Cellular Component	GO:0016020	membrane	Rab6a	IDA		Rat	PMID:8807639|RGD:2306441
Cellular Component	GO:0098793	presynapse	Rab6a	EXP		Rat	PMID:20926670|RGD:13432355
Cellular Component	GO:0098793	presynapse	Rab6a	IDA		Rat	PMID:20926670|RGD:13432355
Cellular Component	GO:0005802	trans-Golgi network	RAB6A	IDA		Human	PMID:12447383
Biological Process	GO:0019882	antigen processing and presentation	RAB6A	IMP		Human	PMID:19717423
Biological Process	GO:0034498	early endosome to Golgi transport	RAB6A	IMP		Human	PMID:17562788
Biological Process	GO:0051179	localization	RAB6A	EXP		Human	PMID:18243103
Biological Process	GO:0018125	peptidyl-cysteine methylation	RAB6A	IDA		Human	PMID:11121396
Biological Process	GO:0034067	protein localization to Golgi apparatus	RAB6A	IDA		Human	PMID:12447383
Biological Process	GO:0034067	protein localization to Golgi apparatus	RAB6A	IDA		Human	PMID:18243103
Biological Process	GO:1903292	protein localization to Golgi membrane	RAB6A	IMP		Human	PMID:25492866
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	RAB6A	IMP		Human	PMID:25962623

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern