Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CEACAM4
  • Mouse genes Psg22
  • Rat genes LOC102557319,Psg19
  • Zfish genes si:ch73-27e22.4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psg22

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045545	syndecan binding	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0001816	cytokine production	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0007565	female pregnancy	Psg19	IEP		Rat	PMID:8068638|RGD:1298757
Biological Process	GO:0010934	macrophage cytokine production	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0006909	phagocytosis	CEACAM4	IDA		Human	PMID:25567962
Biological Process	GO:0045766	positive regulation of angiogenesis	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0001819	positive regulation of cytokine production	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0060907	positive regulation of macrophage cytokine production	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0071636	positive regulation of transforming growth factor beta production	Psg22	IDA		Mouse	PMID:22423048
Biological Process	GO:0071604	transforming growth factor beta production	Psg22	IDA		Mouse	PMID:22423048

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern