Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PLAGL1
  • Mouse genes Plagl1
  • Rat genes Plagl1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Plagl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	PLAGL1	IDA		Human	PMID:15888726
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	PLAGL1	IDA		Human	PMID:9671765
Molecular Function	GO:0005515	protein binding	PLAGL1	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PLAGL1	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Plagl1	IPI	PR:P18911	Mouse	PMID:19389355
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	PLAGL1	IDA		Human	PMID:9671765
Cellular Component	GO:0005794	Golgi apparatus	PLAGL1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	PLAGL1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	PLAGL1	IDA		Human	GO_REF:0000052
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	PLAGL1	IDA		Human	PMID:15888726
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	PLAGL1	IDA		Human	PMID:9671765
Biological Process	GO:0010468	regulation of gene expression	Plagl1	IGI	MGI:MGI:97858	Mouse	PMID:19389355
Biological Process	GO:0035914	skeletal muscle cell differentiation	Plagl1	IMP		Mouse	PMID:22147266

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern