Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDZD7
  • Mouse genes Pdzd7
  • Rat genes Pdzd7
  • Zfish genes pdzd7a,pdzd7b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdzd7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Pdzd7	IPI	PR:E9Q9W7	Mouse	PMID:25406310
Molecular Function	GO:0005515	protein binding	PDZD7	IPI	UniProtKB:Q495M9	Human	PMID:19028668
Molecular Function	GO:0005515	protein binding	PDZD7	IPI	UniProtKB:O75445	Human	PMID:20440071
Molecular Function	GO:0005515	protein binding	PDZD7	IPI	UniProtKB:Q8WXG9	Human	PMID:20440071
Molecular Function	GO:0005515	protein binding	Pdzd7	IPI	UniProtKB:P97479	Mouse	MGI:MGI:5806014|PMID:27525485
Molecular Function	GO:0005515	protein binding	Pdzd7	IPI	UniProtKB:Q2QI47|UniProtKB:Q8VHN7	Mouse	MGI:MGI:6214629|PMID:23055499
Molecular Function	GO:0005515	protein binding	Pdzd7	IPI	UniProtKB:Q8VHN7	Mouse	MGI:MGI:6212875|PMID:24962568
Molecular Function	GO:0005515	protein binding	Pdzd7	IPI	PR:Q80VW5	Mouse	PMID:25406310
Molecular Function	GO:0005515	protein binding	Pdzd7	IPI	PR:Q9ES64-3	Mouse	PMID:19028668
Cellular Component	GO:0005929	cilium	PDZD7	IDA		Human	PMID:20440071
Cellular Component	GO:0005615	extracellular space	PDZD7	HDA		Human	PMID:22664934
Cellular Component	GO:0005654	nucleoplasm	PDZD7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PDZD7	IDA		Human	PMID:20440071
Cellular Component	GO:0002141	stereocilia ankle link	Pdzd7	IDA		Mouse	MGI:MGI:5806014|PMID:27525485
Cellular Component	GO:0002141	stereocilia ankle link	Pdzd7	IDA		Mouse	MGI:MGI:5698752|PMID:26401052
Cellular Component	GO:0002141	stereocilia ankle link	Pdzd7	IDA		Mouse	PMID:24334608
Cellular Component	GO:0002142	stereocilia ankle link complex	Pdzd7	IDA		Mouse	MGI:MGI:5806014|PMID:27525485
Cellular Component	GO:0032420	stereocilium	Pdzd7	IDA		Mouse	MGI:MGI:5806014|PMID:27525485
Cellular Component	GO:0032420	stereocilium	Pdzd7	IDA		Mouse	PMID:31448880
Cellular Component	GO:1990696	USH2 complex	Pdzd7	IPI		Mouse	MGI:MGI:5618171|PMID:25406310
Cellular Component	GO:1990696	USH2 complex	Pdzd7	IDA		Mouse	PMID:25406310
Biological Process	GO:0060117	auditory receptor cell development	Pdzd7	IMP	MGI:MGI:4433578	Mouse	PMID:24334608
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Pdzd7	IMP	MGI:MGI:4433578	Mouse	PMID:24334608
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	Pdzd7	IMP	MGI:MGI:4433578	Mouse	PMID:24334608
Biological Process	GO:0051649	establishment of localization in cell	Pdzd7	IMP	MGI:MGI:4433578	Mouse	PMID:24334608
Biological Process	GO:0045184	establishment of protein localization	Pdzd7	IMP	MGI:MGI:4433578	Mouse	PMID:24334608
Biological Process	GO:0042462	eye photoreceptor cell development	pdzd7a	IMP	ZFIN:ZDB-MRPHLNO-100624-9	Zfish	PMID:20440071
Biological Process	GO:0042462	eye photoreceptor cell development	pdzd7a	IGI	ZFIN:ZDB-MRPHLNO-100617-4,ZFIN:ZDB-MRPHLNO-100624-9	Zfish	PMID:20440071
Biological Process	GO:0042462	eye photoreceptor cell development	pdzd7a	IGI	ZFIN:ZDB-MRPHLNO-100617-5,ZFIN:ZDB-MRPHLNO-100624-9	Zfish	PMID:20440071
Biological Process	GO:0060119	inner ear receptor cell development	pdzd7a	IMP	ZFIN:ZDB-MRPHLNO-100624-9	Zfish	PMID:20440071

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern