Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OLFM1
  • Mouse genes Olfm1
  • Rat genes Olfm1
  • Zfish genes olfm1a,olfm1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Olfm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	OLFM1	IPI	UniProtKB:Q9NRI5-1	Human	PMID:17043677
Molecular Function	GO:0005515	protein binding	Olfm1	IPI	UniProtKB:O70585	Mouse	MGI:MGI:6695862|PMID:17265465
Molecular Function	GO:0005515	protein binding	Olfm1	IPI	UniProtKB:P84060	Mouse	MGI:MGI:6695862|PMID:17265465
Molecular Function	GO:0005515	protein binding	Olfm1	IPI	PR:O88998-4	Mouse	PMID:15927402
Molecular Function	GO:0005515	protein binding	Olfm1	IPI	PR:O88998-3	Mouse	PMID:15927402
Cellular Component	GO:0032281	AMPA glutamate receptor complex	Olfm1	IDA		Mouse	PMID:22632720
Cellular Component	GO:0030424	axon	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Cellular Component	GO:0044295	axonal growth cone	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Cellular Component	GO:0005783	endoplasmic reticulum	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Cellular Component	GO:0005783	endoplasmic reticulum	Olfm1	IDA		Mouse	MGI:MGI:6695862|PMID:17265465
Cellular Component	GO:0005615	extracellular space	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Cellular Component	GO:0099243	extrinsic component of synaptic membrane	Olfm1	IDA		Mouse	PMID:25218043
Cellular Component	GO:0099243	extrinsic component of synaptic membrane	Olfm1	IEP		Mouse	PMID:25218043
Cellular Component	GO:0098978	glutamatergic synapse	Olfm1	IDA		Mouse	PMID:25218043
Cellular Component	GO:0098978	glutamatergic synapse	Olfm1	IEP		Mouse	PMID:25218043
Cellular Component	GO:0043025	neuronal cell body	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Cellular Component	GO:0097060	synaptic membrane	Olfm1	IDA		Mouse	PMID:25218043
Biological Process	GO:0007409	axonogenesis	olfm1a	IGI	ZFIN:ZDB-GENE-990415-174	Zfish	PMID:22923615
Biological Process	GO:0007409	axonogenesis	olfm1a	IMP	ZFIN:ZDB-MRPHLNO-081017-1	Zfish	PMID:22923615
Biological Process	GO:0007409	axonogenesis	olfm1a	IMP	ZFIN:ZDB-MRPHLNO-081017-1	Zfish	PMID:18667622
Biological Process	GO:0023041	neuronal signal transduction	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Biological Process	GO:0043065	positive regulation of apoptotic process	OLFM1	IDA		Human	PMID:16751333
Biological Process	GO:0061075	positive regulation of neural retina development	olfm1a	IMP		Zfish	PMID:18667622|ZFIN:ZDB-PUB-080801-19
Biological Process	GO:0030516	regulation of axon extension	Olfm1	IDA		Mouse	MGI:MGI:5688832|PMID:22923615
Biological Process	GO:0060041	retina development in camera-type eye	olfm1a	IMP	ZFIN:ZDB-MRPHLNO-081017-1	Zfish	PMID:18667622

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern