Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NACA
  • Mouse genes Naca
  • Rat genes Naca
  • Zfish genes naca
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Naca

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0017025	TBP-class protein binding	Naca	IDA		Mouse	PMID:9488445
Molecular Function	GO:0003713	transcription coactivator activity	Naca	IDA		Mouse	PMID:9488445
Cellular Component	GO:0005737	cytoplasm	Naca	IDA		Mouse	PMID:9488445
Cellular Component	GO:0005737	cytoplasm	naca	IDA		Zfish	PMID:19211926
Cellular Component	GO:0005634	nucleus	Naca	IDA		Mouse	PMID:9488445
Cellular Component	GO:0005634	nucleus	naca	IDA		Zfish	PMID:19211926
Biological Process	GO:0003231	cardiac ventricle development	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0060216	definitive hemopoiesis	naca	IMP	ZFIN:ZDB-MRPHLNO-170912-2	Zfish	PMID:26411530
Biological Process	GO:0060216	definitive hemopoiesis	naca	IMP	ZFIN:ZDB-MRPHLNO-170912-3	Zfish	PMID:26411530
Biological Process	GO:0060216	definitive hemopoiesis	naca	IMP	ZFIN:ZDB-GENO-171101-2	Zfish	PMID:26411530
Biological Process	GO:0007507	heart development	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0061384	heart trabecula morphogenesis	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0051451	myoblast migration	Naca	IMP		Mouse	PMID:23662692
Biological Process	GO:0030239	myofibril assembly	naca	IMP	ZFIN:ZDB-MRPHLNO-100608-1	Zfish	PMID:19211926
Biological Process	GO:0010664	negative regulation of striated muscle cell apoptotic process	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:2000138	positive regulation of cell proliferation involved in heart morphogenesis	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0048633	positive regulation of skeletal muscle tissue growth	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0048742	regulation of skeletal muscle fiber development	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0043403	skeletal muscle tissue regeneration	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677
Biological Process	GO:0042060	wound healing	Naca	IMP		Mouse	MGI:MGI:4867362|PMID:21071677

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern