Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MYSM1
  • Mouse genes Mysm1
  • Rat genes Mysm1
  • Zfish genes mysm1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mysm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042393	histone binding	MYSM1	IDA		Human	PMID:17707232
Molecular Function	GO:0140950	histone H2A deubiquitinase activity	MYSM1	IMP		Human	PMID:17707232
Molecular Function	GO:0140492	metal-dependent deubiquitinase activity	MYSM1	IDA		Human	PMID:17707232
Molecular Function	GO:0005515	protein binding	MYSM1	IPI	UniProtKB:Q5T2T1	Human	PMID:32296183
Molecular Function	GO:0003713	transcription coactivator activity	MYSM1	IDA		Human	PMID:17707232
Cellular Component	GO:0005730	nucleolus	MYSM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	MYSM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	MYSM1	IDA		Human	PMID:17707232
Cellular Component	GO:0032991	protein-containing complex	MYSM1	IPI	UniProtKB:P52732,UniProtKB:P98175,UniProtKB:Q92831	Human	PMID:17707232
Biological Process	GO:0006338	chromatin remodeling	MYSM1	IMP		Human	PMID:17707232
Biological Process	GO:1904888	cranial skeletal system development	mysm1	IMP	ZFIN:ZDB-MRPHLNO-100226-11	Zfish	PMID:28450118
Biological Process	GO:0043473	pigmentation	Mysm1	IMP	MGI:MGI:4362924	Mouse	PMID:25340873
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	MYSM1	IMP		Human	PMID:17707232
Biological Process	GO:0030334	regulation of cell migration	Mysm1	IMP	MGI:MGI:4362924	Mouse	PMID:24721909
Biological Process	GO:0051797	regulation of hair follicle development	Mysm1	IMP	MGI:MGI:4362924	Mouse	PMID:24721909
Biological Process	GO:1903706	regulation of hemopoiesis	MYSM1	IMP		Human	PMID:26220525

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern