Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MYBBP1A
  • Mouse genes Mybbp1a
  • Rat genes Mybbp1a
  • Zfish genes mybbp1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mybbp1a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070888	E-box binding	Mybbp1a	IPI	UniProtKB:O08785|UniProtKB:P97784	Mouse	MGI:MGI:5009503|PMID:19129230
Molecular Function	GO:0005515	protein binding	Mybbp1a	IPI	UniProtKB:O08785|UniProtKB:P97784	Mouse	MGI:MGI:5009503|PMID:19129230
Molecular Function	GO:0005515	protein binding	Mybbp1a	IPI	UniProtKB:P12813	Mouse	MGI:MGI:5644023|PMID:19321449
Molecular Function	GO:0005515	protein binding	Mybbp1a	IPI	UniProtKB:P52293	Mouse	MGI:MGI:3688337|PMID:12941609
Molecular Function	GO:0005515	protein binding	Mybbp1a	IPI	PR:O70343	Mouse	PMID:14744933
Molecular Function	GO:0005515	protein binding	Mybbp1a	IPI	PR:P06876	Mouse	PMID:8302594
Molecular Function	GO:0003723	RNA binding	MYBBP1A	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	MYBBP1A	HDA		Human	PMID:22681889
Molecular Function	GO:0043565	sequence-specific DNA binding	Mybbp1a	IDA		Rat	PMID:2261643|RGD:61666
Molecular Function	GO:0003714	transcription corepressor activity	Mybbp1a	IDA		Mouse	MGI:MGI:5009503|PMID:19129230
Cellular Component	GO:0110016	B-WICH complex	MYBBP1A	IDA		Human	PMID:16603771
Cellular Component	GO:0005737	cytoplasm	Mybbp1a	IDA		Mouse	MGI:MGI:3688337|PMID:12941609
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	MYBBP1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	MYBBP1A	HDA		Human	PMID:16210410
Cellular Component	GO:0016020	membrane	MYBBP1A	HDA		Human	PMID:19946888
Cellular Component	GO:0042564	NLS-dependent protein nuclear import complex	Mybbp1a	IDA		Mouse	MGI:MGI:3688337|PMID:12941609
Cellular Component	GO:0005730	nucleolus	MYBBP1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	MYBBP1A	IDA		Human	PMID:21471221
Cellular Component	GO:0005730	nucleolus	Mybbp1a	IDA		Mouse	MGI:MGI:3688337|PMID:12941609
Cellular Component	GO:0005730	nucleolus	Mybbp1a	IDA		Mouse	MGI:MGI:5009503|PMID:19129230
Cellular Component	GO:0005634	nucleus	MYBBP1A	IDA		Human	PMID:21471221
Cellular Component	GO:0005634	nucleus	Mybbp1a	IDA		Mouse	MGI:MGI:3688337|PMID:12941609
Cellular Component	GO:0005634	nucleus	Mybbp1a	IDA		Rat	PMID:2261643|RGD:61666
Biological Process	GO:0042149	cellular response to glucose starvation	MYBBP1A	IDA		Human	PMID:21471221
Biological Process	GO:0032922	circadian regulation of gene expression	Mybbp1a	IDA		Mouse	MGI:MGI:5009503|PMID:19129230
Biological Process	GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	MYBBP1A	IMP		Human	PMID:21471221
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Mybbp1a	IDA		Mouse	MGI:MGI:5009503|PMID:19129230
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Mybbp1a	IDA		Mouse	PMID:14744933
Biological Process	GO:0001649	osteoblast differentiation	MYBBP1A	HDA		Human	PMID:16210410
Biological Process	GO:2000210	positive regulation of anoikis	MYBBP1A	IMP		Human	PMID:23388179
Biological Process	GO:0045945	positive regulation of transcription by RNA polymerase III	MYBBP1A	IDA		Human	PMID:16603771
Biological Process	GO:1903450	regulation of G1 to G0 transition	MYBBP1A	IMP		Human	PMID:21471221
Biological Process	GO:0022904	respiratory electron transport chain	Mybbp1a	IDA		Mouse	PMID:14744933

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern