Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MBL1P
  • Mouse genes Mbl1
  • Rat genes Mbl1
  • Zfish genes hbl1,hbl2,hbl4,mbl2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mbl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Mbl1	IDA		Rat	PMID:10913141|RGD:633275
Molecular Function	GO:0005509	calcium ion binding	Mbl1	IDA		Rat	PMID:11850428|RGD:13792540
Molecular Function	GO:0120153	calcium-dependent carbohydrate binding	Mbl1	IDA		Rat	PMID:11850428|RGD:13792540
Molecular Function	GO:0048306	calcium-dependent protein binding	Mbl1	IPI	UniProtKB:Q8CHN8	Rat	PMID:10913141|RGD:633275
Molecular Function	GO:0042802	identical protein binding	Mbl1	IPI	RGD:3055	Rat	PMID:22167201|RGD:7247590
Molecular Function	GO:0005537	mannose binding	Mbl1	IDA		Rat	PMID:11850428|RGD:13792540
Molecular Function	GO:0005537	mannose binding	Mbl1	IDA		Rat	PMID:16272342|RGD:1582134
Molecular Function	GO:0005537	mannose binding	Mbl1	IDA		Rat	PMID:22167201|RGD:7247590
Molecular Function	GO:0070492	oligosaccharide binding	Mbl1	IDA		Rat	PMID:11850428|RGD:13792540
Molecular Function	GO:0070273	phosphatidylinositol-4-phosphate binding	Mbl1	IDA		Rat	PMID:9315725|RGD:6903277
Molecular Function	GO:0030247	polysaccharide binding	Mbl1	IDA		Rat	PMID:16272342|RGD:1582134
Molecular Function	GO:0002020	protease binding	Mbl1	IDA		Rat	PMID:16272342|RGD:1582134
Molecular Function	GO:0005515	protein binding	Mbl1	IPI	RGD:620214	Rat	PMID:20118239|RGD:7242176
Molecular Function	GO:0042803	protein homodimerization activity	Mbl1	IPI	UniProtKB:P19999	Rat	PMID:10913141|RGD:633275
Cellular Component	GO:0005615	extracellular space	Mbl1	IDA		Mouse	PMID:15148336
Cellular Component	GO:0005615	extracellular space	Mbl1	IDA		Rat	PMID:10903744|RGD:1582138
Biological Process	GO:0001867	complement activation, lectin pathway	Mbl1	IDA		Mouse	PMID:15148336
Biological Process	GO:0001867	complement activation, lectin pathway	Mbl1	IGI	MGI:MGI:96924	Mouse	PMID:15148336
Biological Process	GO:0001867	complement activation, lectin pathway	Mbl1	IDA		Rat	PMID:16272342|RGD:1582134
Biological Process	GO:0050830	defense response to Gram-positive bacterium	Mbl1	IGI	MGI:MGI:96924	Mouse	PMID:15148336
Biological Process	GO:0051873	killing by host of symbiont cells	Mbl1	IGI	MGI:MGI:96924	Mouse	PMID:15148336
Biological Process	GO:0050766	positive regulation of phagocytosis	Mbl1	IGI	MGI:MGI:96924	Mouse	PMID:15148336
Biological Process	GO:0070207	protein homotrimerization	Mbl1	IDA		Rat	PMID:11850428|RGD:13792540

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern