Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HNRNPM
  • Mouse genes Hnrnpm
  • Rat genes Hnrnpm
  • Zfish genes hnrnpm
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hnrnpm

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048306	calcium-dependent protein binding	Hnrnpm	IDA		Rat	PMID:11406629|RGD:632922
Molecular Function	GO:1990405	protein antigen binding	Hnrnpm	IDA		Rat	PMID:11406629|RGD:632922
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q92973	Human	PMID:17435768
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q8AZK7	Human	PMID:18457437
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P23246	Human	PMID:19874820
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q15233	Human	PMID:19874820
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:O43660	Human	PMID:20467437
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q99459	Human	PMID:20467437
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P25791	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P25791	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P52597	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q8NEA9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q8WW24	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q99996-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P62937	Human	PMID:25678563
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:O14964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P25800	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P31943	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P43360	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:P52597	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q13077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q96PV6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:Q9BZW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HNRNPM	IPI	UniProtKB:O95271	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Hnrnpm	IPI	UniProtKB:Q4KM71	Rat	PMID:19874820|RGD:8554703
Molecular Function	GO:0005515	protein binding	Hnrnpm	IPI	UniProtKB:Q5FVM4	Rat	PMID:19874820|RGD:8554703
Molecular Function	GO:0019904	protein domain specific binding	HNRNPM	IPI	UniProtKB:Q99698	Human	PMID:11984006
Molecular Function	GO:0003723	RNA binding	HNRNPM	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	HNRNPM	HDA		Human	PMID:22681889
Cellular Component	GO:0071013	catalytic step 2 spliceosome	HNRNPM	IDA		Human	PMID:11991638
Cellular Component	GO:0009986	cell surface	Hnrnpm	IDA		Rat	PMID:14597422|RGD:10054261
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HNRNPM	HDA		Human	PMID:23658023
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Hnrnpm	HDA		Mouse	MGI:MGI:5582867|PMID:23658023
Cellular Component	GO:0070062	extracellular exosome	HNRNPM	HDA		Human	PMID:23533145
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpm	EXP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpm	IDA		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpm	IMP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0016020	membrane	HNRNPM	HDA		Human	PMID:19946888
Cellular Component	GO:0016363	nuclear matrix	HNRNPM	IDA		Human	PMID:19874820
Cellular Component	GO:0005654	nucleoplasm	HNRNPM	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HNRNPM	IDA		Human	PMID:19874820
Cellular Component	GO:0042382	paraspeckles	HNRNPM	IDA		Human	PMID:19874820
Cellular Component	GO:0014069	postsynaptic density	Hnrnpm	EXP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0014069	postsynaptic density	Hnrnpm	IDA		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0005681	spliceosomal complex	HNRNPM	IDA		Human	PMID:9731529
Cellular Component	GO:0045202	synapse	Hnrnpm	EXP		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Hnrnpm	IDA		Mouse	PMID:25211037
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	HNRNPM	IMP		Human	PMID:19874820
Biological Process	GO:1990831	cellular response to carcinoembryonic antigen	Hnrnpm	IEP		Rat	PMID:14597422|RGD:10054261
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Hnrnpm	IEP		Rat	PMID:14597422|RGD:10054261
Biological Process	GO:1904591	positive regulation of protein import	Hnrnpm	IDA		Rat	PMID:11406629|RGD:632922
Biological Process	GO:1900182	positive regulation of protein localization to nucleus	Hnrnpm	IMP		Rat	PMID:14597422|RGD:10054261
Biological Process	GO:0099175	regulation of postsynapse organization	Hnrnpm	IDA		Rat	PMID:22238095|RGD:155230714
Biological Process	GO:0099175	regulation of postsynapse organization	Hnrnpm	IMP		Rat	PMID:22238095|RGD:155230714

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern