Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HNRNPAB
  • Mouse genes Hnrnpab
  • Rat genes Hnrnpab
  • Zfish genes hnrnpaba,hnrnpabb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hnrnpab

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q9H3D4	Human	PMID:12692135
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q9H3D4-1	Human	PMID:12692135
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q9H3D4-2	Human	PMID:12692135
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q9H3D4	Human	PMID:20085233
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q9H3D4-1	Human	PMID:20085233
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	HNRNPAB	IPI	UniProtKB:Q15637	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	Hnrnpab	IPI	UniProtKB:Q62318	Mouse	MGI:MGI:3698386|PMID:17273560
Molecular Function	GO:0005515	protein binding	Hnrnpab	IPI	RGD:71058	Rat	PMID:16518874|RGD:10054427
Molecular Function	GO:0044877	protein-containing complex binding	Hnrnpab	IDA		Rat	PMID:11154060|RGD:9999186
Molecular Function	GO:0003723	RNA binding	HNRNPAB	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	HNRNPAB	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Hnrnpab	IPI	EMBL:JX682706	Mouse	PMID:23907535
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	Hnrnpab	IDA		Rat	PMID:11154060|RGD:9999186
Cellular Component	GO:0005737	cytoplasm	Hnrnpab	IDA		Mouse	MGI:MGI:3698386|PMID:17273560
Cellular Component	GO:0030425	dendrite	Hnrnpab	IDA		Rat	PMID:21471000|RGD:9999187
Cellular Component	GO:1990124	messenger ribonucleoprotein complex	Hnrnpab	IDA		Rat	PMID:11937625|RGD:9999180
Cellular Component	GO:0071598	neuronal ribonucleoprotein granule	Hnrnpab	IDA		Rat	PMID:21471000|RGD:9999187
Cellular Component	GO:0005654	nucleoplasm	HNRNPAB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	HNRNPAB	IDA		Human	PMID:12881431
Cellular Component	GO:0005634	nucleus	Hnrnpab	IDA		Mouse	MGI:MGI:3698386|PMID:17273560
Cellular Component	GO:0005634	nucleus	Hnrnpab	IDA		Rat	PMID:11154060|RGD:9999186
Cellular Component	GO:0099523	presynaptic cytosol	Hnrnpab	IDA		Mouse	PMID:21471000
Cellular Component	GO:1990904	ribonucleoprotein complex	HNRNPAB	IDA		Human	PMID:17289661
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	Hnrnpab	IDA		Mouse	MGI:MGI:3698386|PMID:17273560
Biological Process	GO:0071230	cellular response to amino acid stimulus	Hnrnpab	IEP		Rat	PMID:21471000|RGD:9999187
Biological Process	GO:0001837	epithelial to mesenchymal transition	Hnrnpab	IDA		Mouse	MGI:MGI:3698386|PMID:17273560
Biological Process	GO:0016556	mRNA modification	HNRNPAB	IDA		Human	PMID:11134005
Biological Process	GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	HNRNPAB	IDA		Human	PMID:12881431
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Hnrnpab	IGI	MGI:MGI:2443180	Mouse	PMID:23907535
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Hnrnpab	IDA		Mouse	MGI:MGI:3698386|PMID:17273560
Biological Process	GO:0060341	regulation of cellular localization	Hnrnpab	IMP		Rat	PMID:21471000|RGD:9999187
Biological Process	GO:1904580	regulation of intracellular mRNA localization	Hnrnpab	IMP		Rat	PMID:21471000|RGD:9999187

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern