Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HMX3
  • Mouse genes Hmx3
  • Rat genes Hmx3
  • Zfish genes hmx3a,hmx3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hmx3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Hmx3	IDA		Mouse	MGI:MGI:3773266|PMID:10206974
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Hmx3	IMP		Mouse	MGI:MGI:3773266|PMID:10206974
Molecular Function	GO:0043565	sequence-specific DNA binding	Hmx3	IDA		Mouse	PMID:10206974
Biological Process	GO:0007420	brain development	Hmx3	IGI	MGI:MGI:107159	Mouse	PMID:15363417
Biological Process	GO:0043583	ear development	Hmx3	IMP		Mouse	MGI:MGI:3612180|PMID:14695375
Biological Process	GO:0007566	embryo implantation	Hmx3	IMP	MGI:MGI:1857577	Mouse	PMID:9435283
Biological Process	GO:0042472	inner ear morphogenesis	Hmx3	IGI	MGI:MGI:107159	Mouse	PMID:15363417
Biological Process	GO:0042472	inner ear morphogenesis	Hmx3	IMP	MGI:MGI:1857577	Mouse	PMID:9435283
Biological Process	GO:0042472	inner ear morphogenesis	hmx3a	IMP	ZFIN:ZDB-GENO-191122-2	Zfish	PMID:31022185
Biological Process	GO:0042472	inner ear morphogenesis	hmx3a	IGI	ZFIN:ZDB-MRPHLNO-100602-1,ZFIN:ZDB-MRPHLNO-100602-2	Zfish	PMID:20043901
Biological Process	GO:0060135	maternal process involved in female pregnancy	Hmx3	IMP	MGI:MGI:1857577	Mouse	PMID:9435283
Biological Process	GO:0050885	neuromuscular process controlling balance	Hmx3	IMP	MGI:MGI:1857577	Mouse	PMID:9435283
Biological Process	GO:0048916	posterior lateral line development	hmx3a	IGI	ZFIN:ZDB-MRPHLNO-100602-1,ZFIN:ZDB-MRPHLNO-100602-2	Zfish	PMID:20043901

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern