Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GLCE
  • Mouse genes Glce
  • Rat genes Glce
  • Zfish genes glcea,glceb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Glce

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	GLCE	IDA		Human	PMID:30872481
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	GLCE	IDA		Human	PMID:15853773
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	GLCE	IMP		Human	PMID:20118238
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	GLCE	IDA		Human	PMID:30872481
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	Glce	IDA		Mouse	PMID:11279150
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	glceb	IDA		Zfish	PMID:25568314
Molecular Function	GO:0047464	heparosan-N-sulfate-glucuronate 5-epimerase activity	glcea	IGI	ZFIN:ZDB-GENE-040630-8	Zfish	PMID:16156897
Molecular Function	GO:0042802	identical protein binding	glceb	IPI	ZFIN:ZDB-GENE-040630-8	Zfish	PMID:25568314
Molecular Function	GO:0042803	protein homodimerization activity	GLCE	IDA		Human	PMID:30872481
Molecular Function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	Glce	IDA		Mouse	MGI:MGI:2135754|PMID:11279150
Molecular Function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	Glce	IDA		Mouse	PMID:11274177
Molecular Function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	Glce	IMP	MGI:MGI:2670565	Mouse	PMID:12788935
Cellular Component	GO:0005794	Golgi apparatus	Glce	IDA		Mouse	PMID:11687650
Cellular Component	GO:0005794	Golgi apparatus	Glce	IDA		Mouse	PMID:11279150
Biological Process	GO:0009950	dorsal/ventral axis specification	glcea	IGI	ZFIN:ZDB-GENE-040630-8	Zfish	PMID:16156897
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	GLCE	IDA		Human	PMID:20118238
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	GLCE	IDA		Human	PMID:30872481
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	Glce	IMP		Mouse	PMID:30377379
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	Glce	IDA		Mouse	PMID:11279150
Biological Process	GO:0030201	heparan sulfate proteoglycan metabolic process	glcea	IGI	ZFIN:ZDB-GENE-040630-8	Zfish	PMID:16156897
Biological Process	GO:0030210	heparin biosynthetic process	Glce	IDA		Mouse	MGI:MGI:2135754|PMID:11279150

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern