Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ELF1
  • Mouse genes Elf1
  • Rat genes Elf1
  • Zfish genes elf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Elf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ELF1	IDA		Human	PMID:8756667
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Elf1	IMP		Mouse	MGI:MGI:3589353|PMID:16002702
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Elf1	IDA		Mouse	MGI:MGI:3589353|PMID:16002702
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ELF1	IDA		Human	PMID:14970218
Molecular Function	GO:0005515	protein binding	ELF1	IPI	UniProtKB:Q01196	Human	PMID:10207087
Molecular Function	GO:0005515	protein binding	ELF1	IPI	UniProtKB:P08047	Human	PMID:10976766
Molecular Function	GO:0005515	protein binding	ELF1	IPI	UniProtKB:P31276	Human	PMID:18692240
Molecular Function	GO:0005515	protein binding	ELF1	IPI	UniProtKB:P23771	Human	PMID:19674970
Molecular Function	GO:0005515	protein binding	ELF1	IPI	UniProtKB:Q13952-2	Human	PMID:32296183
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ELF1	IDA		Human	PMID:8756667
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Elf1	IDA		Mouse	MGI:MGI:3589353|PMID:16002702
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ELF1	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	ELF1	IDA		Human	PMID:19674970
Cellular Component	GO:0005634	nucleus	Elf1	IDA		Mouse	PMID:19796622
Biological Process	GO:0050860	negative regulation of T cell receptor signaling pathway	Elf1	IGI	MGI:MGI:1926074	Mouse	PMID:14738763
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ELF1	IDA		Human	PMID:19674970
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ELF1	IDA		Human	PMID:14970218
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ELF1	IDA		Human	PMID:19674970
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ELF1	IDA		Human	PMID:8756667
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Elf1	IMP		Mouse	MGI:MGI:3589353|PMID:16002702
Biological Process	GO:0001817	regulation of cytokine production	Elf1	IGI	MGI:MGI:1926074	Mouse	PMID:14738763
Biological Process	GO:0006355	regulation of DNA-templated transcription	Elf1	IMP		Rat	PMID:11210123|RGD:632590

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern