Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DNMBP
  • Mouse genes Dnmbp
  • Rat genes Dnmbp
  • Zfish genes dnmbp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dnmbp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	DNMBP	IDA		Human	PMID:17015620
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	Dnmbp	IDA		Mouse	MGI:MGI:2682085|PMID:14506234
Molecular Function	GO:0005515	protein binding	DNMBP	IPI	UniProtKB:P21575	Human	PMID:16413298
Molecular Function	GO:0005515	protein binding	DNMBP	IPI	UniProtKB:O00401	Human	PMID:17015620
Molecular Function	GO:0005515	protein binding	DNMBP	IPI	UniProtKB:Q07157	Human	PMID:17015620
Molecular Function	GO:0005515	protein binding	DNMBP	IPI	UniProtKB:Q9NQY0	Human	PMID:18654987
Molecular Function	GO:0005515	protein binding	Dnmbp	IPI	PR:P70429	Mouse	PMID:14506234
Cellular Component	GO:0005911	cell-cell junction	DNMBP	IDA		Human	PMID:17015620
Cellular Component	GO:0005794	Golgi apparatus	Dnmbp	IDA		Rat	PMID:14506234|RGD:13513910
Cellular Component	GO:0098793	presynapse	Dnmbp	IDA		Rat	PMID:14506234|RGD:13513910
Cellular Component	GO:0045202	synapse	Dnmbp	IDA		Rat	PMID:14506234|RGD:13513910
Biological Process	GO:0007568	aging	Dnmbp	IEP		Rat	PMID:21232816|RGD:13513898
Biological Process	GO:0060271	cilium assembly	dnmbp	IMP	ZFIN:ZDB-MRPHLNO-160719-3	Zfish	PMID:26895965
Biological Process	GO:0060271	cilium assembly	dnmbp	IMP	ZFIN:ZDB-MRPHLNO-160719-2	Zfish	PMID:26895965
Biological Process	GO:0060271	cilium assembly	dnmbp	IGI	ZFIN:ZDB-MRPHLNO-150120-1,ZFIN:ZDB-MRPHLNO-160719-2	Zfish	PMID:26895965
Biological Process	GO:0001822	kidney development	dnmbp	IMP	ZFIN:ZDB-MRPHLNO-160719-3	Zfish	PMID:26895965
Biological Process	GO:0001822	kidney development	dnmbp	IMP	ZFIN:ZDB-MRPHLNO-160719-2	Zfish	PMID:26895965
Biological Process	GO:0008360	regulation of cell shape	DNMBP	IMP		Human	PMID:17015620

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern