Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CREG1
  • Mouse genes Creg1
  • Rat genes Creg1
  • Zfish genes creg1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Creg1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008134	transcription factor binding	Creg1	IDA		Mouse	PMID:9710587
Cellular Component	GO:0005768	endosome	Creg1	IDA		Mouse	PMID:33966596
Cellular Component	GO:0070062	extracellular exosome	CREG1	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	CREG1	IDA		Human	PMID:25645918
Cellular Component	GO:0005764	lysosome	Creg1	IDA		Mouse	PMID:33966596
Cellular Component	GO:0005667	transcription regulator complex	Creg1	IDA		Mouse	PMID:9710587
Biological Process	GO:0006914	autophagy	Creg1	IMP	MGI:MGI:7384603	Mouse	PMID:33966596
Biological Process	GO:0006897	endocytosis	Creg1	IMP		Mouse	PMID:33966596
Biological Process	GO:0007042	lysosomal lumen acidification	Creg1	IMP		Mouse	PMID:33966596
Biological Process	GO:0007040	lysosome organization	Creg1	IMP		Mouse	PMID:33966596
Biological Process	GO:0006355	regulation of DNA-templated transcription	Creg1	IDA		Mouse	PMID:9710587

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern