Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CGNL1
  • Mouse genes Cgnl1
  • Rat genes Cgnl1
  • Zfish genes cgnl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cgnl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CGNL1	IPI	UniProtKB:Q9Y3L3	Human	PMID:22891260
Molecular Function	GO:0005515	protein binding	CGNL1	IPI	UniProtKB:Q07157	Human	PMID:25753039
Molecular Function	GO:0005515	protein binding	CGNL1	IPI	UniProtKB:Q6ZSZ5	Human	PMID:25753039
Cellular Component	GO:0015629	actin cytoskeleton	Cgnl1	IDA		Mouse	PMID:15292197
Cellular Component	GO:0043296	apical junction complex	Cgnl1	IDA		Mouse	PMID:15292197
Cellular Component	GO:0005923	bicellular tight junction	Cgnl1	IDA		Mouse	PMID:22946046
Cellular Component	GO:0032991	protein-containing complex	CGNL1	IDA		Human	PMID:25753039
Biological Process	GO:0007015	actin filament organization	CGNL1	IMP		Human	PMID:22891260
Biological Process	GO:0051058	negative regulation of small GTPase mediated signal transduction	CGNL1	IMP		Human	PMID:22891260
Biological Process	GO:0051497	negative regulation of stress fiber assembly	CGNL1	IMP		Human	PMID:25753039
Biological Process	GO:0150105	protein localization to cell-cell junction	CGNL1	IMP	UniProtKB:P18206|UniProtKB:Q6ZSZ5	Human	PMID:25753039

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern