Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDH11
  • Mouse genes Cdh11
  • Rat genes Cdh11
  • Zfish genes cdh11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005737	cytoplasm	Cdh11	IDA		Mouse	PMID:12139922
Cellular Component	GO:0070062	extracellular exosome	CDH11	HDA		Human	PMID:23533145
Cellular Component	GO:0098978	glutamatergic synapse	Cdh11	IDA		Mouse	PMID:10860580
Cellular Component	GO:0005886	plasma membrane	Cdh11	IDA		Mouse	PMID:12139922
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Cdh11	IMP		Mouse	PMID:10860580
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Cdh11	IDA		Mouse	PMID:10860580
Cellular Component	GO:0045202	synapse	Cdh11	IDA		Mouse	PMID:10860580
Biological Process	GO:0007155	cell adhesion	CDH11	IMP		Human	PMID:33811546
Biological Process	GO:0021957	corticospinal tract morphogenesis	Cdh11	IGI	MGI:MGI:1930001	Mouse	PMID:22284184
Biological Process	GO:0048041	focal adhesion assembly	CDH11	IMP		Human	PMID:33811546
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Cdh11	IDA		Mouse	PMID:10860580
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Cdh11	IMP		Mouse	PMID:10860580
Biological Process	GO:0030336	negative regulation of cell migration	CDH11	IMP		Human	PMID:33811546
Biological Process	GO:0048840	otolith development	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-7	Zfish	PMID:19582870
Biological Process	GO:0048840	otolith development	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-6	Zfish	PMID:19582870
Biological Process	GO:0048840	otolith development	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-5	Zfish	PMID:19582870
Biological Process	GO:0060041	retina development in camera-type eye	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-7	Zfish	PMID:22247003
Biological Process	GO:0060041	retina development in camera-type eye	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-6	Zfish	PMID:22247003
Biological Process	GO:0060041	retina development in camera-type eye	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-5	Zfish	PMID:22247003
Biological Process	GO:0031290	retinal ganglion cell axon guidance	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-7	Zfish	PMID:22247003
Biological Process	GO:0031290	retinal ganglion cell axon guidance	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-6	Zfish	PMID:22247003
Biological Process	GO:0031290	retinal ganglion cell axon guidance	cdh11	IMP	ZFIN:ZDB-MRPHLNO-100511-5	Zfish	PMID:22247003

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern