Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCAR1
  • Mouse genes Ccar1
  • Rat genes Ccar1
  • Zfish genes ccar1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccar1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030374	nuclear receptor coactivator activity	CCAR1	IGI	UniProtKB:P03372	Human	PMID:18722177
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q969Q1	Human	PMID:18157088
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q9EPK5	Human	PMID:20594350
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q9GZV5	Human	PMID:20594350
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:P10275	Human	PMID:23887938
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:P23769	Human	PMID:23887938
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:P15976	Human	PMID:24245781
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q9NQM4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCAR1	IPI	UniProtKB:Q5JR59-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ccar1	IPI	UniProtKB:P17679|UniProtKB:Q15648|UniProtKB:Q8CGU1	Mouse	MGI:MGI:5606145|PMID:24245781
Molecular Function	GO:0003723	RNA binding	CCAR1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CCAR1	HDA		Human	PMID:22681889
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	CCAR1	IDA		Human	PMID:24245781
Molecular Function	GO:0003713	transcription coactivator activity	CCAR1	IMP		Human	PMID:23887938
Molecular Function	GO:0003713	transcription coactivator activity	CCAR1	IDA		Human	PMID:24245781
Molecular Function	GO:0003713	transcription coactivator activity	Ccar1	IMP		Mouse	MGI:MGI:5606145|PMID:24245781
Molecular Function	GO:0003714	transcription corepressor activity	CCAR1	IMP		Human	PMID:23887938
Cellular Component	GO:0005641	nuclear envelope lumen	CCAR1	IDA		Human	PMID:12816952
Biological Process	GO:0043065	positive regulation of apoptotic process	CCAR1	IDA		Human	PMID:12816952
Biological Process	GO:0030335	positive regulation of cell migration	CCAR1	IMP		Human	PMID:23887938
Biological Process	GO:0008284	positive regulation of cell population proliferation	CCAR1	IMP		Human	PMID:23887938

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern