Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BOC
  • Mouse genes Boc
  • Rat genes Boc
  • Zfish genes boc
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Boc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	boc	IDA		Zfish	PMID:18296487
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:Q32MD9	Human	PMID:11782431
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:Q4KMG0	Human	PMID:11782431
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:O43323	Human	PMID:20519495
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:Q14623	Human	PMID:20519495
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:O35158	Human	PMID:21802063
Molecular Function	GO:0005515	protein binding	BOC	IPI	UniProtKB:Q01721	Human	PMID:21802063
Molecular Function	GO:0005515	protein binding	Boc	IPI	UniProtKB:Q01721	Mouse	MGI:MGI:5444826|PMID:21802063
Molecular Function	GO:0005515	protein binding	Boc	IPI	PR:Q62226	Mouse	PMID:17086203
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A4JYL6	Zfish	PMID:18296487
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A2CF10	Zfish	PMID:18296487
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A8BB40	Zfish	PMID:19765300
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A8BBF9	Zfish	PMID:19765300
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:Q90413	Zfish	PMID:18296487
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A8BBG8	Zfish	PMID:19765300
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:A8BBG3	Zfish	PMID:19765300
Molecular Function	GO:0005515	protein binding	boc	IPI	UniProtKB:Q7ZU88	Zfish	PMID:18296487
Cellular Component	GO:0030424	axon	Boc	IDA		Mouse	PMID:17086203
Cellular Component	GO:0044295	axonal growth cone	Boc	IDA		Rat	PMID:20053908|RGD:5683891
Cellular Component	GO:0030426	growth cone	Boc	IDA		Mouse	PMID:17086203
Cellular Component	GO:0043025	neuronal cell body	Boc	IDA		Mouse	PMID:17086203
Biological Process	GO:0007411	axon guidance	Boc	IMP	MGI:MGI:3692939	Mouse	PMID:17086203
Biological Process	GO:0007411	axon guidance	boc	IMP	ZFIN:ZDB-MRPHLNO-050518-1	Zfish	PMID:15776441
Biological Process	GO:0007411	axon guidance	boc	IMP	ZFIN:ZDB-MRPHLNO-050517-1	Zfish	PMID:15776441
Biological Process	GO:0030030	cell projection organization	Boc	IMP	MGI:MGI:3692939	Mouse	PMID:17086203
Biological Process	GO:0045663	positive regulation of myoblast differentiation	Boc	IMP		Mouse	MGI:MGI:2152959|PMID:11782431
Biological Process	GO:0008589	regulation of smoothened signaling pathway	boc	IMP	ZFIN:ZDB-GENO-980202-1092	Zfish	PMID:21115611
Biological Process	GO:0031290	retinal ganglion cell axon guidance	boc	IMP	ZFIN:ZDB-GENO-980202-1092	Zfish	PMID:9007260
Biological Process	GO:0007224	smoothened signaling pathway	Boc	IDA		Mouse	PMID:16647303

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern