Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BAP1
  • Mouse genes Bap1
  • Rat genes Bap1
  • Zfish genes bap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	BAP1	IDA		Human	PMID:19815555
Molecular Function	GO:0031490	chromatin DNA binding	Bap1	IDA		Mouse	PMID:22878500
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	BAP1	IDA		Human	PMID:18757409
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	BAP1	IDA		Human	PMID:19188440
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	BAP1	IDA		Human	PMID:19815555
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	BAP1	IDA		Human	PMID:20436459
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	BAP1	IDA		Human	PMID:24703950
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P38398	Human	PMID:19117993
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q99728	Human	PMID:19117993
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P51610	Human	PMID:19188440
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P51610	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q8IXJ9	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P51610	Human	PMID:19815555
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q8IXJ9	Human	PMID:20436459
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q8IXJ9	Human	PMID:22897849
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P51610	Human	PMID:24211834
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P85037	Human	PMID:25451922
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q01167	Human	PMID:25451922
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P51610	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q8IXJ9	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:Q14573	Human	PMID:28614305
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P38398	Human	PMID:9528852
Molecular Function	GO:0005515	protein binding	BAP1	IPI	UniProtKB:P38398-5	Human	PMID:9528852
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:P59598	Mouse	PMID:22878500
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:Q61191	Mouse	PMID:22878500
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:Q8CIG3	Mouse	PMID:22878500
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:Q8CGY8	Mouse	PMID:22878500
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:Q8BZ32	Mouse	PMID:22878500
Molecular Function	GO:0005515	protein binding	Bap1	IPI	UniProtKB:P38398	Mouse	PMID:9528852
Cellular Component	GO:0005737	cytoplasm	BAP1	IDA		Human	PMID:18757409
Cellular Component	GO:0005737	cytoplasm	BAP1	IDA		Human	PMID:19188440
Cellular Component	GO:0005737	cytoplasm	BAP1	IDA		Human	PMID:24703950
Cellular Component	GO:0005829	cytosol	BAP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	BAP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	BAP1	IDA		Human	PMID:18757409
Cellular Component	GO:0005634	nucleus	BAP1	IDA		Human	PMID:19188440
Cellular Component	GO:0005634	nucleus	BAP1	IDA		Human	PMID:19815555
Cellular Component	GO:0005634	nucleus	BAP1	IDA		Human	PMID:24703950
Cellular Component	GO:0035517	PR-DUB complex	BAP1	IPI		Human	PMID:20436459
Cellular Component	GO:0035517	PR-DUB complex	BAP1	IDA		Human	PMID:20436459
Cellular Component	GO:0035517	PR-DUB complex	BAP1	IDA		Human	PMID:25451922
Biological Process	GO:0008283	cell population proliferation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0035726	common myeloid progenitor cell proliferation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:1904888	cranial skeletal system development	bap1	IMP	ZFIN:ZDB-MRPHLNO-100225-28	Zfish	PMID:28450118
Biological Process	GO:0030218	erythrocyte differentiation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0043249	erythrocyte maturation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0010467	gene expression	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0030851	granulocyte differentiation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0061484	hematopoietic stem cell homeostasis	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0001701	in utero embryonic development	Bap1	IMP	MGI:MGI:5439653	Mouse	PMID:22878500
Biological Process	GO:0070661	leukocyte proliferation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0061519	macrophage homeostasis	Bap1	IMP	MGI:MGI:5439653	Mouse	PMID:26119930
Biological Process	GO:0000278	mitotic cell cycle	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	BAP1	IDA		Human	PMID:20436459
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	BAP1	IDA		Human	PMID:25451922
Biological Process	GO:0035520	monoubiquitinated protein deubiquitination	BAP1	IDA		Human	PMID:24703950
Biological Process	GO:0033028	myeloid cell apoptotic process	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	BAP1	IDA		Human	PMID:25451922
Biological Process	GO:0070050	neuron cellular homeostasis	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0030223	neutrophil differentiation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0007219	Notch signaling pathway	bap1	IMP	ZFIN:ZDB-MRPHLNO-100225-28	Zfish	PMID:20040115
Biological Process	GO:0043363	nucleate erythrocyte differentiation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0036344	platelet morphogenesis	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:1903955	positive regulation of protein targeting to mitochondrion	BAP1	HMP		Human	PMID:24270810
Biological Process	GO:0016579	protein deubiquitination	BAP1	IDA		Human	PMID:18757409
Biological Process	GO:0016579	protein deubiquitination	BAP1	IDA		Human	PMID:19815555
Biological Process	GO:0071108	protein K48-linked deubiquitination	BAP1	IMP		Human	PMID:19188440
Biological Process	GO:0051726	regulation of cell cycle	BAP1	IMP		Human	PMID:19188440
Biological Process	GO:0001558	regulation of cell growth	BAP1	IMP		Human	PMID:19815555
Biological Process	GO:1900015	regulation of cytokine production involved in inflammatory response	Bap1	IMP	MGI:MGI:5439653	Mouse	PMID:26119930
Biological Process	GO:0050727	regulation of inflammatory response	Bap1	IMP	MGI:MGI:5439653	Mouse	PMID:26119930
Biological Process	GO:0010035	response to inorganic substance	Bap1	IMP	MGI:MGI:5439653	Mouse	PMID:26119930
Biological Process	GO:0002574	thrombocyte differentiation	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500
Biological Process	GO:0001894	tissue homeostasis	Bap1	IMP	MGI:MGI:5439652	Mouse	PMID:22878500

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern