Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATL1
  • Mouse genes Atl1
  • Rat genes Atl1
  • Zfish genes atl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005525	GTP binding	Atl1	IMP		Rat	PMID:16537571|RGD:8553504
Molecular Function	GO:0003924	GTPase activity	ATL1	IDA		Human	PMID:14506257
Molecular Function	GO:0003924	GTPase activity	Atl1	IDA		Rat	PMID:16537571|RGD:8553504
Molecular Function	GO:0042802	identical protein binding	ATL1	IDA		Human	PMID:14506257
Molecular Function	GO:0042802	identical protein binding	ATL1	IPI	UniProtKB:Q8WXF7	Human	PMID:21220294
Molecular Function	GO:0042802	identical protein binding	ATL1	IPI	UniProtKB:Q8WXF7	Human	PMID:21368113
Molecular Function	GO:0042802	identical protein binding	ATL1	IPI	UniProtKB:Q8WXF7	Human	PMID:23334294
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9UBP0	Human	PMID:16815977
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q60870	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9ES97	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9ES97-3	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9JK11-3	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9NQC3	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9NQC3-1	Human	PMID:19665976
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9H902	Human	PMID:20200447
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q5T4F4	Human	PMID:23969831
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q8TCG5	Human	PMID:25751282
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:O00628-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P04156	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P19404	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P35240	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P41219	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P50897	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P51149	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:P54577	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q16637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q8N5K1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q8WXH2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q96CV9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATL1	IPI	UniProtKB:Q9BZ23-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q3TXX3|UniProtKB:Q5T4F4	Mouse	MGI:MGI:5588096|PMID:24668814
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q60870	Rat	PMID:19665976|RGD:8554793
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q9ES97	Rat	PMID:19665976|RGD:8554793
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q9JK11-1	Rat	PMID:19665976|RGD:8554793
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q9NQC3	Rat	PMID:19665976|RGD:8554793
Molecular Function	GO:0005515	protein binding	Atl1	IPI	UniProtKB:Q15041	Rat	PMID:24262037|RGD:11059584
Cellular Component	GO:0005737	cytoplasm	Atl1	IDA		Mouse	PMID:22984613
Cellular Component	GO:0005783	endoplasmic reticulum	ATL1	IDA		Human	PMID:19665976
Cellular Component	GO:0005783	endoplasmic reticulum	Atl1	IDA		Rat	PMID:16537571|RGD:8553504
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Atl1	IDA		Rat	PMID:14506257|RGD:1359760
Cellular Component	GO:0071782	endoplasmic reticulum tubular network	Atl1	IDA		Mouse	MGI:MGI:5588096|PMID:24668814
Cellular Component	GO:0098826	endoplasmic reticulum tubular network membrane	ATL1	IDA		Human	PMID:27619977
Cellular Component	GO:0005794	Golgi apparatus	Atl1	IDA		Rat	PMID:14506257|RGD:1359760
Cellular Component	GO:0005794	Golgi apparatus	Atl1	IDA		Rat	PMID:16537571|RGD:8553504
Cellular Component	GO:0000137	Golgi cis cisterna	Atl1	IDA		Rat	PMID:14506257|RGD:1359760
Cellular Component	GO:0005770	late endosome	atl1	IDA		Zfish	PMID:20935645
Cellular Component	GO:0016020	membrane	ATL1	IDA		Human	PMID:14506257
Biological Process	GO:0007411	axon guidance	atl1	IGI	ZFIN:ZDB-GENE-040426-2331	Zfish	PMID:30082270
Biological Process	GO:0007411	axon guidance	atl1	IMP	ZFIN:ZDB-MRPHLNO-101105-4	Zfish	PMID:30082270
Biological Process	GO:0007409	axonogenesis	Atl1	IMP		Rat	PMID:16537571|RGD:8553504
Biological Process	GO:0048263	determination of dorsal identity	atl1	IGI	ZFIN:ZDB-GENO-980202-879	Zfish	PMID:20935645
Biological Process	GO:0048263	determination of dorsal identity	atl1	IDA		Zfish	PMID:20935645
Biological Process	GO:0007029	endoplasmic reticulum organization	ATL1	IDA		Human	PMID:19665976
Biological Process	GO:1990809	endoplasmic reticulum tubular network membrane organization	ATL1	IMP		Human	PMID:27619977
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	atl1	IDA		Zfish	PMID:20935645
Biological Process	GO:0051260	protein homooligomerization	ATL1	IDA		Human	PMID:14506257

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern