Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARID3A
  • Mouse genes Arid3a
  • Rat genes Arid3a
  • Zfish genes arid3a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arid3a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Arid3a	IDA		Mouse	PMID:21955986
Molecular Function	GO:0003677	DNA binding	Arid3a	IDA		Mouse	PMID:15456761
Molecular Function	GO:0042802	identical protein binding	Arid3a	IPI	PR:Q62431	Mouse	PMID:15456761
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q06187	Human	PMID:19214191
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q5I0X7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:O15479	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:O15481	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:O60220	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:P23025	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q15014	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q6BDI9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:Q9UBU8-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARID3A	IPI	UniProtKB:X5D778	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Arid3a	IPI	PR:P35991	Mouse	PMID:15456761
Molecular Function	GO:0005515	protein binding	Arid3a	IPI	PR:A6PWV5	Mouse	PMID:21955986
Molecular Function	GO:0003712	transcription coregulator activity	Arid3a	IDA		Mouse	PMID:21955986
Molecular Function	GO:0003712	transcription coregulator activity	Arid3a	IDA		Mouse	PMID:15456761
Cellular Component	GO:0005829	cytosol	ARID3A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045121	membrane raft	ARID3A	IDA		Human	PMID:21955986
Cellular Component	GO:0005654	nucleoplasm	ARID3A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Arid3a	IDA		Mouse	PMID:15456761
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Arid3a	IMP		Mouse	MGI:MGI:3525407|PMID:15456761
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Arid3a	IGI	MGI:MGI:3650624	Mouse	PMID:21955986
Biological Process	GO:0006355	regulation of DNA-templated transcription	Arid3a	IDA		Mouse	PMID:15456761

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern