Gene Expression Data
Assay Details
Assay
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Reference:
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J:171281
Nakagawa S, et al., Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol. 2011 Apr 4;193(1):31-9
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5770399
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Gene symbol:
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Neat1
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Gene name:
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nuclear paraspeckle assembly transcript 1 (non-protein coding)
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Probe:
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NEAT1_2 probe
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Probe preparation:
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labelled with digoxigenin
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1B stomach:
postnatal adult
(more )
Specimen
1B stomach:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: stomach |
Strong |
Regionally restricted |
1B stomach NEAT1_2
|
Intense expression in the most distal regions of the surface epithelium.
|
Specimen
1B intestine:
postnatal adult
(more )
Specimen
1B intestine:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
1B liver:
postnatal adult
(more )
Specimen
1B liver:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: liver |
Weak |
Regionally restricted |
1B liver NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1B lung:
postnatal adult
(more )
Specimen
1B lung:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: lung |
Weak |
Regionally restricted |
1B lung NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1B kidney:
postnatal adult
(more )
Specimen
1B kidney:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: metanephros |
Weak |
Regionally restricted |
1B kidney NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1B muscle:
postnatal adult
(more )
Specimen
1B muscle:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: musculature |
Weak |
Regionally restricted |
1B muscle NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1B heart:
postnatal adult
(more )
Specimen
1B heart:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: heart |
Weak |
Regionally restricted |
1B heart NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1B brain:
postnatal adult
(more )
Specimen
1B brain:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: brain |
Weak |
Regionally restricted |
1B brain NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
1D G. ridge:
embryonic day 9.5
(more )
Specimen
1D G. ridge:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
1D hindgut:
embryonic day 9.5
(more )
Specimen
1D hindgut:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
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Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
2A:
postnatal adult
(more )
Specimen
2A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: stomach epithelium |
Strong |
Regionally restricted |
2A NEAT1_2
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Strong expression in surface layer, but not deep layer, of gastric epithelium.
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Specimen
3E WT stomach:
embryonic day 18.5
(more )
Specimen
3E WT stomach:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
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Cryosection
|
Specimen
3E KO stomach:
(close )
Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6Ncrlj * CBA/JNCrlj
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Mutant Allele(s):
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Neat1tm1.1Shna/Neat1tm1.1Shna
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Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3E WT intestine:
embryonic day 18.5
(more )
Specimen
3E WT intestine:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3E KO intestine:
(close )
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6Ncrlj * CBA/JNCrlj
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Mutant Allele(s):
|
Neat1tm1.1Shna/Neat1tm1.1Shna
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
5A WT:
postnatal adult
(more )
Note: Zymogenic region of stomach.
Specimen
5A WT:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Zymogenic region of stomach.
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: stomach epithelium |
Present |
Regionally restricted |
5A WT NEAT1_2
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Expression restricted to a subpopulation of surface mucous cells facing the lumen of the stomach.
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Specimen
5A KO:
(close )
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6Ncrlj * CBA/JNCrlj
|
Mutant Allele(s):
|
Neat1tm1.1Shna/Neat1tm1.1Shna
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Zymogenic region of stomach.
|
Specimen
S1 esophagus:
postnatal adult
(more )
Specimen
S1 esophagus:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: esophagus |
Weak |
Regionally restricted |
S1_esophagus NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 forestomach:
postnatal adult
(more )
Specimen
S1 forestomach:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
S1 colon:
postnatal adult
(more )
Specimen
S1 colon:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: colon |
Weak |
Regionally restricted |
S1_colon NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 salivary g.:
postnatal adult
(more )
Specimen
S1 salivary g.:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: salivary gland |
Weak |
Regionally restricted |
S1_salivary g. NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
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Specimen
S1 adrenal g.:
postnatal adult
(more )
Specimen
S1 adrenal g.:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: adrenal gland |
Weak |
Regionally restricted |
S1_adrenal g. NEAT1_2
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Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 Harderian g.:
postnatal adult
(more )
Specimen
S1 Harderian g.:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: Harderian gland |
Weak |
Regionally restricted |
S1_Harderian g. NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 pancreas:
postnatal adult
(more )
Specimen
S1 pancreas:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: pancreas |
Weak |
Regionally restricted |
S1_pancreas NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 bladder:
postnatal adult
(more )
Specimen
S1 bladder:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: bladder |
Weak |
Regionally restricted |
S1_bladder NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 skin:
postnatal adult
(more )
Specimen
S1 skin:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: skin |
Weak |
Regionally restricted |
S1_skin NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 spleen:
postnatal adult
(more )
Specimen
S1 spleen:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: spleen |
Weak |
Regionally restricted |
S1_spleen NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 ovary:
postnatal adult
(more )
Specimen
S1 ovary:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Female
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: ovary |
Weak |
Regionally restricted |
S1_ovary NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S1 testis:
postnatal adult
(more )
Specimen
S1 testis:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Male
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: testis |
Weak |
Regionally restricted |
S1_testis NEAT1_2
|
Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.
|
Specimen
S2A Liver (1):
postnatal adult
(more )
Specimen
S2A Liver (1):
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: liver |
Present |
|
S2A Liver (1) NEAT1_2
|
Authors state expression levels were highly variable between animals in certain tissues such as liver.
|
Specimen
S2B Liver (2):
postnatal adult
(more )
Specimen
S2B Liver (2):
(close )
Genetic Background:
|
Not Specified
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: liver |
Present |
|
S2B Liver (2) NEAT1_2
|
Authors state expression levels were highly variable between animals in certain tissues such as liver.
|
|