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Gene Expression Data
Assay Details
Assay
Reference: J:171281 Nakagawa S, et al., Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol. 2011 Apr 4;193(1):31-9
Assay type: RNA in situ
MGI Accession ID: MGI:5770399
Gene symbol: Neat1
Gene name: nuclear paraspeckle assembly transcript 1 (non-protein coding)
Probe: NEAT1_2 probe
Probe preparation: labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 1B stomach: postnatal adult (more )
Structure Level Pattern Image Note
TS28: stomach Strong Regionally restricted 1B stomach NEAT1_2 Intense expression in the most distal regions of the surface epithelium.

Specimen 1B intestine: postnatal adult (more )
Structure Level Pattern Image Note
TS28: intestine Strong Regionally restricted 1B intestine NEAT1_2 Intense expression in the most distal regions of the surface epithelium.

Specimen 1B liver: postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Weak Regionally restricted 1B liver NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1B lung: postnatal adult (more )
Structure Level Pattern Image Note
TS28: lung Weak Regionally restricted 1B lung NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1B kidney: postnatal adult (more )
Structure Level Pattern Image Note
TS28: metanephros Weak Regionally restricted 1B kidney NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1B muscle: postnatal adult (more )
Structure Level Pattern Image Note
TS28: musculature Weak Regionally restricted 1B muscle NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1B heart: postnatal adult (more )
Structure Level Pattern Image Note
TS28: heart Weak Regionally restricted 1B heart NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1B brain: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain Weak Regionally restricted 1B brain NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen 1D G. ridge: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: urogenital ridge Weak 1D G. ridge NEAT1_2

Specimen 1D hindgut: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: hindgut Weak 1D hindgut NEAT1_2

Specimen 2A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: stomach epithelium Strong Regionally restricted 2A NEAT1_2 Strong expression in surface layer, but not deep layer, of gastric epithelium.

Specimen 3E WT stomach: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: stomach Weak 3E WT stomach NEAT1_2

Specimen 3E KO stomach: embryonic day 18.5; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Structure Level Pattern Image Note
TS26: stomach Absent 3E KO stomach NEAT1_2

Specimen 3E WT intestine: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: intestine Weak 3E WT intestine NEAT1_2

Specimen 3E KO intestine: embryonic day 18.5; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Structure Level Pattern Image Note
TS26: intestine Absent 3E KO intestine NEAT1_2

Specimen 5A WT: postnatal adult (more )
Note: Zymogenic region of stomach.
Structure Level Pattern Image Note
TS28: stomach epithelium Present Regionally restricted 5A WT NEAT1_2 Expression restricted to a subpopulation of surface mucous cells facing the lumen of the stomach.

Specimen 5A KO: postnatal adult; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Note: Zymogenic region of stomach.
Structure Level Pattern Image Note
TS28: stomach epithelium Absent 5A KO NEAT1_2

Specimen S1 esophagus: postnatal adult (more )
Structure Level Pattern Image Note
TS28: esophagus Weak Regionally restricted S1_esophagus NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 forestomach: postnatal adult (more )
Structure Level Pattern Image Note
TS28: stomach proventricular region Weak Regionally restricted S1_forestomach NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 colon: postnatal adult (more )
Structure Level Pattern Image Note
TS28: colon Weak Regionally restricted S1_colon NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 salivary g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: salivary gland Weak Regionally restricted S1_salivary g. NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 adrenal g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: adrenal gland Weak Regionally restricted S1_adrenal g. NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 Harderian g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: Harderian gland Weak Regionally restricted S1_Harderian g. NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 pancreas: postnatal adult (more )
Structure Level Pattern Image Note
TS28: pancreas Weak Regionally restricted S1_pancreas NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 bladder: postnatal adult (more )
Structure Level Pattern Image Note
TS28: bladder Weak Regionally restricted S1_bladder NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 skin: postnatal adult (more )
Structure Level Pattern Image Note
TS28: skin Weak Regionally restricted S1_skin NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 spleen: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spleen Weak Regionally restricted S1_spleen NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 ovary: postnatal adult (more )
Structure Level Pattern Image Note
TS28: ovary Weak Regionally restricted S1_ovary NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S1 testis: postnatal adult (more )
Structure Level Pattern Image Note
TS28: testis Weak Regionally restricted S1_testis NEAT1_2 Expression low or absent in most tissues. Strong expression restricted to a limited subpopulation of particular cell types.

Specimen S2A Liver (1): postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Present S2A Liver (1) NEAT1_2 Authors state expression levels were highly variable between animals in certain tissues such as liver.

Specimen S2B Liver (2): postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Present S2B Liver (2) NEAT1_2 Authors state expression levels were highly variable between animals in certain tissues such as liver.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/04/2024
MGI 6.13
The Jackson Laboratory