Prdm1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Prdm1
PR domain containing 1, with ZNF domain
MGI:99655

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IBA	J:265628
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:1990226	histone methyltransferase binding	IPI	J:109626
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0008168	methyltransferase activity	IEA	J:60000
Molecular Function	GO:1990841	promoter-specific chromatin binding	IDA	J:232474
Molecular Function	GO:0005515	protein binding	IPI	J:175905
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:0016740	transferase activity	IEA	J:60000
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IBA	J:265628
Cellular Component	GO:0005737	cytoplasm	IDA	J:109626
Cellular Component	GO:0005730	nucleolus	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:109626
Cellular Component	GO:0005634	nucleus	IDA	J:115995
Biological Process	GO:0002250	adaptive immune response	IEA	J:60000
Biological Process	GO:0035904	aorta development	IMP	J:222159
Biological Process	GO:0048844	artery morphogenesis	IGI	J:213584
Biological Process	GO:0048844	artery morphogenesis	IMP	J:213584
Biological Process	GO:0048844	artery morphogenesis	IMP	J:213584
Biological Process	GO:0003279	cardiac septum development	IMP	J:222159
Biological Process	GO:0045165	cell fate commitment	IBA	J:265628
Biological Process	GO:0045165	cell fate commitment	IMP	J:101718
Biological Process	GO:0045165	cell fate commitment	IMP	J:99994
Biological Process	GO:0048869	cellular developmental process	IEA	J:72247
Biological Process	GO:0060976	coronary vasculature development	IMP	J:222159
Biological Process	GO:0001892	embryonic placenta development	IMP	J:101718
Biological Process	GO:0042462	eye photoreceptor cell development	IMP	J:160529
Biological Process	GO:0042462	eye photoreceptor cell development	IMP	J:160529
Biological Process	GO:0010467	gene expression	IDA	J:109626
Biological Process	GO:0007281	germ cell development	IGI	J:151610
Biological Process	GO:0003170	heart valve development	IMP	J:222159
Biological Process	GO:0002376	immune system process	IEA	J:60000
Biological Process	GO:0001701	in utero embryonic development	IMP	J:101718
Biological Process	GO:0045087	innate immune response	IEA	J:60000
Biological Process	GO:0060576	intestinal epithelial cell development	IMP	J:173543
Biological Process	GO:0060576	intestinal epithelial cell development	IMP	J:173543
Biological Process	GO:0001822	kidney development	IMP	J:231949
Biological Process	GO:0001893	maternal placenta development	IMP	J:101718
Biological Process	GO:0032259	methylation	IEA	J:60000
Biological Process	GO:0001763	morphogenesis of a branching structure	IMP	J:213584
Biological Process	GO:0001763	morphogenesis of a branching structure	IMP	J:213584
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0010629	negative regulation of gene expression	IMP	J:173543
Biological Process	GO:0010629	negative regulation of gene expression	IMP	J:173543
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:160529
Biological Process	GO:0018216	peptidyl-arginine methylation	IDA	J:109626
Biological Process	GO:0010628	positive regulation of gene expression	IDA	J:138571
Biological Process	GO:0009791	post-embryonic development	IMP	J:173543
Biological Process	GO:0009791	post-embryonic development	IMP	J:173543
Biological Process	GO:0042127	regulation of cell population proliferation	IMP	J:213584
Biological Process	GO:0042127	regulation of cell population proliferation	IMP	J:213584
Biological Process	GO:0033082	regulation of extrathymic T cell differentiation	IMP	J:232474
Biological Process	GO:0032823	regulation of natural killer cell differentiation	IMP	J:232474
Biological Process	GO:0051136	regulation of NK T cell differentiation	IMP	J:232474
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IMP	J:240687
Biological Process	GO:0060040	retinal bipolar neuron differentiation	IMP	J:240687
Biological Process	GO:1990654	sebum secreting cell proliferation	IDA	J:115995
Biological Process	GO:0060707	trophoblast giant cell differentiation	IMP	J:187742
Biological Process	GO:0003281	ventricular septum development	IMP	J:222159

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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