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Ifi204
Gene Detail
Symbol

Name
ID
Ifi204
interferon activated gene 204
MGI:96429
Synonyms
p204
Feature Type
protein coding gene
Genetic Map
Chromosome 1
80.63 cM
Detailed Genetic Map ± 1 cM


Mapping data(12)
Sequence Map
Chr1:173747293-173766943 bp, - strand
From VEGA annotation of GRCm38

  19651 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:115929  Vertebrate Homology Class
1 human; 12 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque

HCOP human homology predictions: IFI16
Gene Tree: Ifi204

Human
homologs
IFI16, interferon, gamma-inducible protein 16
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 3428
neXtProt AC: NX_Q16666

Human Synonyms: IFNGIP1, PYHIN2

Human Chr (Location): 1q22; chr1:158999973-159055155 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ifi204 interacts with 82 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process cellular response to interferon-beta, inner ear development, ...
Component cytoplasm, membrane, ...
Function core promoter binding, double-stranded DNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (2)    Tissues (2)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 2
cDNA source data(21)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(36) Genomic(11) cDNA(24) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000033920 (Evidence)
Ensembl Gene Model ENSMUSG00000073489 (Evidence)
Entrez Gene 15951 (Evidence)
UniGene 261270
DFCI TC1582989, TC1596340
Consensus CDS Project CCDS35792.1
International Mouse Phenotyping Consortium Status Ifi204
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033920 VEGA Gene Model | MGI Sequence Detail 19651 C57BL/6J ±  kb
transcript OTTMUST00000085571 VEGA | MGI Sequence Detail 2253 Not Applicable 
polypeptide OTTMUSP00000046247 VEGA | MGI Sequence Detail 619 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(4)
Polymorphisms
RFLP(6) : SNPs within 2kb(487 from dbSNP Build 137)    SNPs within 2kb including multiple locations(739)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000009174 interferon-activable protein 204
References
(Earliest) J:9942 Opdenakker G, et al., Interferons as gene activators: a cluster of six interferon-activatable genes is linked to the erythroid alpha-spectrin locus on murine chromosome 1. Virology. 1989 Aug;171(2):568-78
(Latest) J:174607 Lu CC, et al., Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly. J Neurosci. 2011 Jul 27;31(30):10903-18
All references(41)
Other
accession IDs
MGD-MRK-11222

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory