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Ifi204
Gene Detail
 Symbol
Name
ID
Ifi204
interferon activated gene 204
MGI:96429
Synonyms p204
Feature Type protein coding gene
Genetic Map
Chromosome 1
80.63 cM
Detailed Genetic Map ± 1 cM


Mapping data(12)
Sequence Map
Chr1:173747293-173766876 bp, - strand
From VEGA annotation of GRCm38

  19584 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:115929  Vertebrate Homology Class
1 human; 11 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque

Gene Tree: Ifi204

Human
homologs
Human Homolog IFI16, interferon, gamma-inducible protein 16
NCBI Gene ID 3428
neXtProt AC  NX_Q16666
Human Synonyms  IFNGIP1, PYHIN2
Human Chr (Location)  1q22; chr1:158999973-159055155 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ifi204 interacts with 82 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process cellular response to interferon-beta, inner ear development, ...
Component cytoplasm, membrane, ...
Function double-stranded DNA binding, poly(A) RNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (2)    Tissues (2)    Images (1)
Theiler Stages: 26
Assay TypeResults
Immunohistochemistry 2
cDNA source data(21)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(36) Genomic(11) cDNA(24) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000033920 (Evidence)
Ensembl Gene ModelENSMUSG00000073489 (Evidence)
Entrez Gene15951 (Evidence)
UniGene261270
DFCITC1582989, TC1596340
Consensus CDS ProjectCCDS35792.1
International Mouse Knockout Project StatusIfi204
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033920 VEGA Gene Model | MGI Sequence Detail 19584 C57BL/6J ±  kb
transcript OTTMUST00000085571 VEGA | MGI Sequence Detail 2253 Not Applicable 
polypeptide OTTMUSP00000046247 VEGA | MGI Sequence Detail 619 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(16)
Polymorphisms RFLP(6) : SNPs within 2kb(487 from dbSNP Build 137)    SNPs within 2kb including multiple locations(739)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000009174 interferon-activable protein 204
References (Earliest) J:9942 Opdenakker G, et al., Interferons as gene activators: a cluster of six interferon-activatable genes is linked to the erythroid alpha-spectrin locus on murine chromosome 1. Virology. 1989 Aug;171(2):568-78
(Latest) J:174607 Lu CC, et al., Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly. J Neurosci. 2011 Jul 27;31(30):10903-18
All references(41)
Other
accession IDs
MGD-MRK-11222

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory