Fli1
Gene Detail

Symbol

Name
ID

Fli1
Friend leukemia integration 1
MGI:95554

Synonyms

EWSR2, Fli-1, Sic1, SIC-1

Feature Type

protein coding gene

Genetic Map

Chromosome 9
17.74 cM
Detailed Genetic Map ± 1 cM


Mapping data(21)

Sequence Map

Chr9:32422204-32542861 bp, - strand From VEGA annotation of GRCm38   120658 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:55624  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: transcription factor erg
Gene Tree: Fli1

Human
homologs

Human Homolog		FLI1, Fli-1 proto-oncogene, ETS transcription factor
NCBI Gene ID		2313
neXtProt AC		NX_Q01543
Human Synonyms		EWSR2, SIC-1
Human Chr (Location)		11q24.1-q24.3; chr11:128686535-128813267 (+)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(11) : Gene trapped(1) Targeted(10)
Incidental mutations (data from Mutagenetix , APF )
 

Mice homozygous for most knock-out allele exhibit abnormal hematopoietic and immune systems.

 
Human Diseases Modeled in Mice Using Fli1 (1)    Mutations Annotated to Human Diseases (1)   

Interactions

Fli1 interacts with 275 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (18 annotations)

Process	blood circulation, cellular process, ...
Component	nucleus
Function	chromatin binding, DNA binding, ...

External Resources: FuncBase

Expression

Literature Summary: (19 records)

Data Summary: Results (127)    Tissues (93)    Images (19)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	115
In situ reporter (knock in)	3
Western blot	3
RT-PCR	6

cDNA source data(32)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(48) Genomic(14) cDNA(32) Primer pair(2)
Microarray probesets(5)

Other database
links

VEGA Gene Model	OTTMUSG00000044678 (Evidence)
Ensembl Gene Model	ENSMUSG00000016087 (Evidence)
Entrez Gene	14247 (Evidence)
UniGene	258908
DFCI	TC1577491
DoTS	DT.110628293, DT.485049
NIA Mouse Gene Index	U030653
Consensus CDS Project	CCDS40571.1
International Mouse Knockout Project Status	Fli1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000044678	VEGA Gene Model | MGI Sequence Detail	120658	C57BL/6J
transcript	OTTMUST00000117512	VEGA | MGI Sequence Detail	3318	Not Applicable
polypeptide	OTTMUSP00000065699	VEGA | MGI Sequence Detail	452	Not Applicable

All sequences(39) RefSeq(6) UniProt(5)

Polymorphisms

RFLP(2) : SNPs within 2kb(1220 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR000418	Ets domain
InterPro	IPR003118	Pointed domain
InterPro	IPR013761	Sterile alpha motif/pointed domain
InterPro	IPR011991	Winged helix-turn-helix DNA-binding domain
Protein Ontology	PR:000007553	friend leukemia integration 1 transcription factor

References

(Earliest) J:10321 Ben-David Y, et al., Identification and mapping of a common proviral integration site Fli-1 in erythroleukemia cells induced by Friend murine leukemia virus. Proc Natl Acad Sci U S A. 1990 Feb;87(4):1332-6
(Latest) J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
All references(98)
Disease annotation references (1)

Other
accession IDs

MGD-MRK-9824, MGD-MRK-9825