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Chrnd Gene Detail
Summary
  • Symbol
    Chrnd
  • Name
    cholinergic receptor, nicotinic, delta polypeptide
  • Synonyms
    Achr-4, Acrd
  • Feature Type
    protein coding gene
  • IDs
    MGI:87893
    NCBI Gene: 11447
  • Gene Overview
    MyGene.info: CHRND
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:87190607-87200070 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 44.07 cM
  • Mapping Data
    12 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_87893
protein coding gene Chr1:87190597-87200070 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016259
protein coding gene Chr1:88526567-88537519 (+)
A/J MGP_AJ_G0016240
protein coding gene Chr1:85218872-85229174 (+)
AKR/J MGP_AKRJ_G0016201
protein coding gene Chr1:87735119-87746013 (+)
BALB/cJ MGP_BALBcJ_G0016197
protein coding gene Chr1:85338335-85351416 (+)
C3H/HeJ MGP_C3HHeJ_G0016025
protein coding gene Chr1:87994819-88005515 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016653
protein coding gene Chr1:91866535-91875815 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014375
protein coding gene Chr1:79668993-79678411 (+)
CAST/EiJ MGP_CASTEiJ_G0015610
protein coding gene Chr1:87198276-87208810 (+)
CBA/J MGP_CBAJ_G0016001
protein coding gene Chr1:94735578-94745815 (+)
DBA/2J MGP_DBA2J_G0016104
protein coding gene Chr1:84522290-84535041 (+)
FVB/NJ MGP_FVBNJ_G0016103
protein coding gene Chr1:83582762-83593836 (+)
LP/J MGP_LPJ_G0016175
protein coding gene Chr1:89591335-89600639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016129
protein coding gene Chr1:98025616-98037776 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016696
protein coding gene Chr1:87834713-87846940 (+)
PWK/PhJ MGP_PWKPhJ_G0015397
protein coding gene Chr1:83818927-83830521 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015177
protein coding gene Chr1:86759606-86770578 (+)
WSB/EiJ MGP_WSBEiJ_G0015674
protein coding gene Chr1:87503720-87518658 (+)



Homology
more
  • Human Ortholog
    CHRND, cholinergic receptor nicotinic delta subunit
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CHRND, cholinergic receptor nicotinic delta subunit
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ACHRD, CMS2A, CMS3A, CMS3B, CMS3C, FCCMS, SCCMS
  • Links
    NCBI Gene ID: 1144
    neXtProt AC: NX_Q07001
    UniProt: Q07001

  • Chr Location
    2q37.1; chr2:232526160-232537907 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 37340
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CHRND
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with Chrnd mouse models; 4 with human CHRND associations

Human Disease Mouse Models
      
IDs
View 1 model
      
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000026251 Ensembl Gene Model | MGI Sequence Detail 9464 C57BL/6J ±  kb
    transcript ENSMUST00000073252 Ensembl | MGI Sequence Detail 2925 Not Applicable  
    polypeptide ENSMUSP00000072983 Ensembl | MGI Sequence Detail 520 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • Protein Ontology
      PR:000005466 acetylcholine receptor subunit delta
    • InterPro Domains
      IPR006201 Neurotransmitter-gated ion-channel
      IPR018000 Neurotransmitter-gated ion-channel, conserved site
      IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain
      IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily
      IPR006029 Neurotransmitter-gated ion-channel transmembrane domain
      IPR036719 Neurotransmitter-gated ion-channel transmembrane domain superfamily
      IPR002394 Nicotinic acetylcholine receptor
    Molecular
    Reagents
    less
    • All nucleic 25
      Genomic 7
      cDNA 16
      Other 2

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-1039, MGD-MRK-1068, MGI:2138724
    References
    more
    • Summaries
      All 87
      Developmental Gene Expression 20
      Diseases 1
      Gene Ontology 11
      Phenotypes 11
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:225476 Zhu H, et al., Fluoxetine is neuroprotective in slow-channel congenital myasthenic syndrome. Exp Neurol. 2015 Aug;270:88-94

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory