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Gm20644 Gene Detail
Summary
  • Symbol
    Gm20644
  • Name
    predicted gene 20644
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5313091
  • Alliance
Location &
Maps
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  • Sequence Map
    Chr11:98176208-98178270 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 61.75 cM
Strain
Comparison
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  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5313091
lncRNA gene Chr11:98176208-98178270 (+)
129S1/SvImJ MGP_129S1SvImJ_G0037103
sense overlapping lncRNA gene Chr11:100813782-100815828 (+)
A/J MGP_AJ_G0037090
sense overlapping lncRNA gene Chr11:96632610-96634655 (+)
AKR/J MGP_AKRJ_G0037038
sense overlapping lncRNA gene Chr11:99622225-99624216 (+)
BALB/cJ MGP_BALBcJ_G0037081
sense overlapping lncRNA gene Chr11:97122749-97124808 (+)
C3H/HeJ MGP_C3HHeJ_G0036768
sense overlapping lncRNA gene Chr11:99749928-99751919 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037595
sense overlapping lncRNA gene Chr11:103896179-103898153 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034638
sense overlapping lncRNA gene Chr11:94071375-94073425 (+)
CAST/EiJ MGP_CASTEiJ_G0035955
sense overlapping lncRNA gene Chr11:100625215-100627248 (+)
CBA/J MGP_CBAJ_G0036743
sense overlapping lncRNA gene Chr11:108210760-108212751 (+)
DBA/2J MGP_DBA2J_G0036918
sense overlapping lncRNA gene Chr11:96172353-96174344 (+)
FVB/NJ MGP_FVBNJ_G0036868
sense overlapping lncRNA gene Chr11:95679199-95681227 (+)
LP/J MGP_LPJ_G0036965
sense overlapping lncRNA gene Chr11:101290254-101292301 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036876
sense overlapping lncRNA gene Chr11:108013147-108015193 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037712
sense overlapping lncRNA gene Chr11:99950212-99952263 (+)
PWK/PhJ MGP_PWKPhJ_G0035649
sense overlapping lncRNA gene Chr11:97177119-97179092 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035457
sense overlapping lncRNA gene Chr11:99658075-99660098 (+)
WSB/EiJ MGP_WSBEiJ_G0036157
sense overlapping lncRNA gene Chr11:99855232-99857280 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093673 Ensembl Gene Model | MGI Sequence Detail 2063 C57BL/6J ±  kb
transcript ENSMUST00000176721 Ensembl | MGI Sequence Detail 2063 Not Applicable  
For the selected sequence
References
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  • Summaries
    All 7
    Phenotypes 5
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory